Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq185 125 8e-24 seq30 100 3e-16 seq144 87.8 2e-12 >seq185 Length=71559 Score = 125 bits (138), Expect = 8e-24 Identities = 285/419 (68%), Gaps = 25/419 (6%) Strand=Plus/Minus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 ||||||||||| || || || | ||||| | || |||| |||| | ||||||| | Sbjct 53216 CGATCGAAACGTCCAGGCCGCATCAGAGCCTTGTCCAGAACATCGGGTCTGTTTGTACCA 53157 Query 11563 GCAATGACTACAATGCCAGTCTCAT---TGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || | ||| || | | |||| ||| |||||| |||||||| || |||| |||| Sbjct 53156 GCCAAGACAACCA---CTTGCTCAGAGGTGTTGAAACCATCCATTTCAGTAAGAATCTGG 53100 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCT--GCCGAAC---GCT-TC 11673 || | ||| ||||||||||| || |||||| || | ||| || Sbjct 53099 TTCAGCGTGCTCTCACGCTCATCATTTCC------ACCACCAAAGCTTTGCTTTGCTCTC 53046 Query 11674 ---TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 ||||| | || || |||||||| ||||| | ||| || || ||| ||| || Sbjct 53045 GATTTACCTATGGCATCGATCTCATCAATGAAGATGATGCAAGGCGTGTTCTTACGAGCA 52986 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | | || || ||||| ||||| | ||||||||| ||||||||||||||||| | | Sbjct 52985 TTGGCAAAGAGATCACGGACACGGGAAGGTCCAACACCAACGAACATCTCAACGAACTCT 52926 Query 11791 GCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAG-CGATGGCTCGAGCGAGGA 11848 | || || || || || |||||| ||| ||||| | || || || | || || | Sbjct 52925 GAACCACTGACGCT-AAAAAACGGAACACCAGATTCACCGGCCGTTGCCTTG-GCAAGCA 52868 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA 11907 | |||||||| ||||| || | ||||| |||| ||| || || || ||||| |||||| Sbjct 52867 GTGTCTTACCAGTACCGGGAGGACCAGAAAGAATGGCACCGCGAGGAATCTTAGCACCA 52809 >seq30 Length=181176 Score = 100 bits (110), Expect = 3e-16 Identities = 267/408 (65%), Gaps = 9/408 (2%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 ||| ||||| | ||| |||||||||||||| | ||||||| | ||| ||| Sbjct 132922 GAATCCGTCAAGTTCCGTGAGAAGCTGGTTCAGTGTCTGTTTAA---CAT------AGGC 132872 Query 11652 CATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACA 11711 | | | | | | | |||| ||| | || || | |||||| ||||| | |||| Sbjct 132871 CGCATCCCTTTCGTTCCTCTTCGCACCTATGGCATCCAGCTCATCAATGAAGATGATAGC 132812 Query 11712 CGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTAC 11771 ||| ||| ||||| || ||| |||||||| |||||||| || || ||||| || Sbjct 132811 AGGTGCCTTGCTTCGTGCTTGAGTGAACAGTTCACGGACACGCTTGGCACCTACACCAAC 132752 Query 11772 GAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGC 11831 | ||| || |||| | | |||| | | ||| || ||| || ||| || || Sbjct 132751 GTACACTTCGTCGAACTCAGAACCAGACATGTAGAAGAAAGGCACACCAGCCTCTCCTGC 132692 Query 11832 GATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACG 11891 | ||| || || || || ||||| || |||||||| | ||| | ||||| |||| Sbjct 132691 TACGGCACGGGCCAGCAGCGTCTTTCCGGTACCAGGAGGGCCAACAAGAAGCACGCCCTT 132632 Query 11892 GGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTC 11951 || | |||| ||||| | | || || || ||| ||||| || || | ||| Sbjct 132631 CGGCAACTTGCCACCAAGAGAGGAAAATCGTTCTGGGTTCAGCAGGAATTCAACCAGCTC 132572 Query 11952 CTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAAACG 11999 || |||||| ||||| || |||| || | ||||||||||| || Sbjct 132571 CTGAAGTTCTTCCTTAGCTTCGTCGCAGCCATGCACATCGGTGAATCG 132524 >seq144 Length=87426 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||| ||||||||||||||||| |||||||||||||| || |||||| || ||| Sbjct 58865 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTC 58924 Query 136777 GGGAACAGCTTTT 136789 |||| || |||| Sbjct 58925 GGGATCATTTTTT 58937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968645162200