Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq9 107 4e-18 >seq9 Length=276411 Score = 107 bits (118), Expect = 4e-18 Identities = 288/446 (65%), Gaps = 5/446 (1%) Strand=Plus/Minus Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 |||| || || ||||| || ||||| ||||| ||||| ||| ||| || || || | | Sbjct 245157 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTA 245098 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATC 25995 |||||||||| ||| || || |||||||| || ||| || ||||||||||| ||| Sbjct 245097 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCT-TACATTCTCCAACGAGCTTATC 245039 Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055 | || ||||||||||||| || ||||| |||||||||| | || ||| || | Sbjct 245038 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCTGAAC 244982 Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115 || || | ||| || | | ||| || ||||| || |||||| Sbjct 244981 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 244922 Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175 ||||| | | ||||||||| || | ||| || Sbjct 244921 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGC 244862 Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235 || |||||||||| || ||||||| ||| ||| | || || | || || | Sbjct 244861 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTC 244802 Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295 | | | | ||||| || ||||| ||||| ||||| || ||| || |||||||||||| Sbjct 244801 AATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTC 244742 Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321 || || ||| | ||||| || || || Sbjct 244741 TTCGAGAAGCGTGTCGGTGATTACCA 244716 Score = 87.8 bits (96), Expect = 3e-12 Identities = 178/260 (68%), Gaps = 7/260 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 245612 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 245553 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC-TCA 25591 | ||||| | ||| |||| || || || | ||||||| || | ||| || Sbjct 245552 TCTAAGGATCTTCACGACTGGCACAACCGC-CTGAATGATGACGAGC-GCTTCTTCATCT 245495 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 ||| | || |||||||| ||||| || || || || ||||| || ||| ||| Sbjct 245494 CTCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAAC 245435 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | |||| | | || |||||| | ||||| || ||||||||||||||||| | Sbjct 245434 GTTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGA 245375 Query 25712 TCGAAAATGTGCACTCTGAG 25731 |||| || | ||| ||||| Sbjct 245374 TCGAGAACATCCACGCTGAG 245355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928833201050560