Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 3e-15 seq15 93.3 1e-13 seq9 89.7 2e-12 >seq11 Length=265580 Score = 98.7 bits (108), Expect = 3e-15 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 ||||| |||||||| ||| | || || |||||||||||||| ||||| |||||||| Sbjct 939 CGCTGGATATAACCGGTTTCTGCGGTCTTGACAGCTGTATCAATAAGACCCTCACGACCA 998 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAA 302713 |||| || |||||||| | ||| ||| || |||| | ||| ||||| |||| | Sbjct 999 GCCATGGCGTGGAAGAAAAACTCAGTGGGT-GTCAAGCCACGCAA-GTAGGAGTTCTCCA 1056 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 | |||||||| | || || || | ||| ||| || || || |||| || | | || Sbjct 1057 CAAAACCACGGGATTCTGGAGAGTAGTCATCCTTTGTGAAATGGGGCAAAGTACGATACT 1116 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | ||| | |||||||| || || || ||| || || |||| | | | |||||| Sbjct 1117 TGAAACCGAACGGGATACGTTTACCCTCGACGGATTGTTGACCCACGACAGCAGTCATCT 1176 Query 302834 GCGAAATATT 302843 | || || || Sbjct 1177 GGGATATGTT 1186 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||| Sbjct 141 AGAATTTCCTTCAGACGAGGGACACCAAGTGTAACGTT---CTTGGACGAGACACCAGCA 197 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| || ||||| | || |||| |||||| |||||| || || || | Sbjct 198 AAATGGAAAGTGTTTAGAGTCATCTGCGTAGCTGGCTCTCCAATAGACTGGGCAGCGAGA 257 Query 301933 ATACCAACCATTTCTCC 301949 | ||||||||| || || Sbjct 258 ACACCAACCATCTCACC 274 >seq15 Length=227237 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 233276 CCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGAC 233335 |||| ||||||| ||| ||||||||||| ||||| | ||| |||||||| ||| || Sbjct 150633 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 150574 Query 233336 CTACCCTGGACTGTT---TGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 | ||||| ||||| |||||||| | | || || ||||| | |||||| ||| Sbjct 150573 CGACCCT---CTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGC 150517 Query 233393 ATTTTATCTTTAACCATATGCTTCAG 233418 || ||||||| |||||| ||||| || Sbjct 150516 ATCTTATCTTGAACCATGTGCTTGAG 150491 Score = 86.0 bits (94), Expect = 2e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 |||| | ||||| ||| ||||| ||||| ||||| | ||| |||||||| || || | Sbjct 150633 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 150574 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| | ||||||||||| || || | |||||| || || ||| | Sbjct 150573 CGACCCTCTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGCATC 150514 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||||| | ||||| |||||||| ||||||| | |||||| |||||| Sbjct 150513 TTATCTTGAACCATGTGCTTGAGCTTCTGGTAGTAGATAGGACCGGTGAAGA 150462 >seq9 Length=276411 Score = 89.7 bits (98), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA-CAAGCGTGCG 133495 ||||||| ||| ||||| ||||||||||||| ||||||||||| || | || || Sbjct 245226 TTCCTTGCATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGT-CG 245168 Query 133496 AGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCG 133555 | || | | |||||||| || || || | || ||||| || || ||| || | Sbjct 245167 ACCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCC 245108 Query 133556 TTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 ||| |||||| || ||||| || |||||||| | | || || || || || ||| Sbjct 245107 TTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAAC 245048 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || ||||| || | || |||| || ||||| || ||||| Sbjct 245047 GAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 245007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471798761194663