Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq278 125 1e-23 >seq278 Length=40584 Score = 125 bits (138), Expect = 1e-23 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||||| ||||| |||||||| || || ||||| | Sbjct 33428 TACCACCACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGG 33369 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | | || ||||| || || || || || || || || | || || || |||| Sbjct 33368 ACAAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAG 33309 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||| || |||||||||||||||| || ||||| || ||||| || | ||| | Sbjct 33308 GAATTCCCTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAA 33249 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| || || ||||| || || | ||||| || || |||||||| Sbjct 33248 CCTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 33200 Score = 123 bits (136), Expect = 5e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 |||||| || ||||| | || || ||||| ||||| || || || || | | || Sbjct 33643 ACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCC 33584 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || ||||| || || ||||||||||| || | ||| || ||||| || || || ||||| Sbjct 33583 ATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 33524 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||||| || || || || || || || ||| ||||||||||| || Sbjct 33523 GTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAGTGAT 33464 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||||| || | |||||| || || |||||||| Sbjct 33463 AGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 33428 Score = 107 bits (118), Expect = 4e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| | ||| || || || || ||||| || ||||| ||||| || | | || Sbjct 32885 ACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCC 32826 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| || | || || || ||||| || |||||||| Sbjct 32825 ATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTT 32766 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 ||| |||||| ||||| || || || || || || || | | || || |||||||| | Sbjct 32765 ATCCTGAATC-TTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGA 32707 Query 82774 TCGTCTTGCCTGT 82786 | |||||||| || Sbjct 32706 TGGTCTTGCCGGT 32694 Score = 107 bits (118), Expect = 4e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | ||| |||||||| ||||| ||||||||||| ||||| || || || || | Sbjct 33200 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 33141 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | |||||| || || || || ||||| ||||| | | || || || || | Sbjct 33140 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 33081 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || ||||| || || || || |||||| || || || || || ||||| | | || Sbjct 33080 GAATGCCTTCTTTGTCCTGGAT-TTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCA 33022 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 || || | || || ||||| || || | ||||| || Sbjct 33021 ACCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCAC 32984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814632918661