Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576725.1_202016-02-26] 999 sequences; 36,203,959 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq278 143 6e-29 seq84 98.7 2e-15 >seq278 Length=40584 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| | ||| || || || | |||||| || | | || Sbjct 33649 ACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGT 33590 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| ||||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct 33589 GCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACC 33530 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| || ||||| ||||| ||| |||| || || || Sbjct 33529 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAA 33470 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 33469 AGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 33428 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||||| || || |||| || || || | | || | ||||| Sbjct 32881 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCC 32822 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||| |||||||| || Sbjct 32821 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 32762 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| | || || || || ||||| ||| Sbjct 32761 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTC 32702 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 32701 TTGCCGGT 32694 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||||||||| ||||| || || | ||||| || | || ||| | || || Sbjct 33184 CAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTC 33125 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| | || || |||||||| ||||| ||||| ||||| Sbjct 33124 CTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTC 33065 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| || ||| || |||||||| || | || || || | ||||| || Sbjct 33064 CTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGT 33005 Query 225681 CTTGCCCGT 225689 ||| || || Sbjct 33004 CTTTCCAGT 32996 >seq84 Length=124832 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 44457 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 44516 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || ||||| |||||||| |||||||| ||| || ||| Sbjct 44517 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 44576 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 44577 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 44620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192515935973306