Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq92 125 2e-23 seq589 93.3 9e-14 seq947 86.0 1e-11 >seq92 Length=85112 Score = 125 bits (138), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACT 230468 || ||||||||| | ||||||| |||| || ||| ||| ||||||||||| | |||| Sbjct 68584 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTG-CGCTCTTCTTGGCATGAACTCC-AACT 68527 Query 230469 T-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| | |||||||| || ||||| |||||||| | | || || ||||| || | | Sbjct 68526 TGATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACA 68467 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGA 230587 | | ||| | | ||||| |||| || ||||| ||| || || || |||| Sbjct 68466 AGTACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGA 68407 Query 230588 CCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||||||||||| ||||||||| |||| || |||| ||||||||||| Sbjct 68406 CCAACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 68357 >seq589 Length=17322 Score = 93.3 bits (102), Expect = 9e-14 Identities = 432/671 (64%), Gaps = 30/671 (4%) Strand=Plus/Minus Query 281532 CGCTTCACGTTGTCTACGATGTCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCG 281591 ||||| | |||||| |||||||| | ||| || || | || ||| | | ||| ||| Sbjct 12980 CGCTTAAGGTTGTCCACGATGTCCTCGGGGTTGTAGTTAGGGATGGATGAACTCCAGCCG 12921 Query 281592 GTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGATAATAGGTACATAACATTCT 281651 || || ||||| | ||| || |||| || | || | | || || || ||| Sbjct 12920 GTGCCGATACCGTCAGCACCGTTAACCAGGATCATGGGAACGACGGGCACGTAGATTTCC 12861 Query 281652 GGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAGGTTATCATCTGTATCGACG 281711 || || ||||| ||||||||||| | || | || || |||||| | | | Sbjct 12860 GGCTCGATTTTTTCACCATCATCCTCGTTGTAAGTAAGTAGAGGATCATCATGAGCATGG 12801 Query 281712 AAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCT 281771 || || |||| | || ||| ||| ||||||| | ||||| || |||| Sbjct 12800 AAGACACGTCGAGCGAACGGCGACAGGCGAGTGTAGATATAACGAGCACTGGCACAGTCT 12741 Query 281772 TTACCACCCTGCAGCCTCGAC--CCAAACTGACCCTCCGGCAACAACCAGTTAATGTTAT 281829 |||||||| || | ||| ||||| | ||| ||| || ||||| | || | Sbjct 12740 GATCCACCCTGGAGAC--GACTACCAAAGTTACCACTGGGCTCCAGACAGTTTACATTGT 12683 Query 281830 TGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGT 281889 || ||||||| | ||| |||||| |||||| ||| ||| || || | ||||||| Sbjct 12682 TGGACCCGACGAAGCTCTGTGCCAGGCCGACGATGGTCTGCTGCAGGGAGATGTCACCGT 12623 Query 281890 GGTGATAGGCGCTGTGTT--CGGCAACATAACCACTGAACTGTGCTACCTTCACGTCTGA 281947 | ||||| ||| || | | | ||| | ||| || | | ||||||| || Sbjct 12622 GTTGATA--CGCAGTCATACCCGAAACGTGACCCGCTAATTCGACCACCTTCATATCCTT 12565 Query 281948 TGTCAAGTTGCGTTTGAAAGCGCAA-TATAAT--ACTTTTCGTTGAGAAGGCTTGAAACC 282004 ||| ||||||| |||| ||| ||||| || || |||||| ||||||| || Sbjct 12564 CTTCAGGTTGCGTCGGAAA---CAAGTATAAAGAACCTTACGTTGACCGGGCTTGAGGCC 12508 Query 282005 ATCAACGACAGACGGAATGCTGCGTTCCAGGTCATA--CCGCGA----GAACAAAATAAG 282058 ||| ||||| || ||||| || || || ||| |||| | ||| | || || Sbjct 12507 ATCCACGACCGAAGGAAT----CGATC--GGACATTGTCCGCCATACTGAATAGGATGAG 12454 Query 282059 TTCCTTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGTC-AAGTTGGTTTC 282117 ||||||| |||||||||| | || || || | ||| || ||| |||| | Sbjct 12453 CTCCTTGTTGATGAAGTCGGTGTATGAAATCTTGGACACTGAGTGATCCAAGAAGGTT-C 12395 Query 282118 CCGGCTCGTAT-GCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAA 282176 |||||| | || | || || |||||||||||| || |||||| ||||| ||||| | Sbjct 12394 CCGGCTTGAATTGACG-CAACCACTCCTTGCGCTCATCGGCCTTCTTCTTGGAGAAAGCA 12336 Query 282177 CGATCGATGAG 282187 | || || || Sbjct 12335 AGCTCAATCAG 12325 >seq947 Length=2764 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 319819 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGGCCG 319878 ||||| || ||||| |||| || | ||||| |||||| || |||||||| || Sbjct 1618 TCGTGCTCAACGTAGACAGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 1559 Query 319879 TTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 319938 || ||||||||||| || || | ||||| | ||||| || || |||||||| Sbjct 1558 TTGTTGATAGCGCGCATGAGAGTGGTCTTACCAGTACCGTTGGGACCGAGGAGACCGTAA 1499 Query 319939 CGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCATATGCC 319998 || | || || |||||| || | || | |||||| | || || ||||||| ||| Sbjct 1498 CGCTGACCACGCTTCAGGCGGAGATGGGTCTGGTTCAGCAAGATCTTGGCACCATAGGCC 1439 Query 319999 AGAGAAAATTCACAATCACACAGATCCTCACC 320030 || || || || | |||||||||||||| Sbjct 1438 AGGGAGAACGTGCAGTTGCACAGATCCTCACC 1407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810460183370