Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq92 120 3e-22 seq245 93.3 4e-14 seq302 82.4 7e-11 >seq92 Length=85112 Score = 120 bits (132), Expect = 3e-22 Identities = 223/324 (69%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || || ||| || | || || ||| || Sbjct 68803 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTCTGGCTG 68744 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| |||||||||| || || || ||||||| | || || || || ||| Sbjct 68743 AAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATGAG 68684 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA-TAAACCGACGC- 58158 |||||||| ||||| ||||| ||||| | | ||| ||| | ||| ||||| | Sbjct 68683 GGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCGACCCT 68624 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||| | | |||| ||||| || || ||| | || || || ||||| | || | Sbjct 68623 CAGATTG--TGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTGACTG 68566 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | || || || || | || || |||||| | ||||||| |||||||||||| Sbjct 68565 ACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATTGAGT 68506 Query 58279 TTGTTGCCGACAGACTTTTGCTCG 58302 | || |||||| | || || ||| Sbjct 68505 TCGTCGCCGACCGTCTCCTGGTCG 68482 >seq245 Length=51786 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || || || || |||||| | || ||||| | ||| | ||| Sbjct 32598 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCG 32657 Query 31263 A-AACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | |||| | || || | ||| |||||| |||||| | || ||||||||||||||| | Sbjct 32658 ACAACGTT--AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTT 32715 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || ||| | ||| || || || |||||||| || Sbjct 32716 GATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAA 32775 Query 31381 AGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || |||| || Sbjct 32776 GGAATCTACTCTCCACTTGGTTCT 32799 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || || || | || |||||| | ||| Sbjct 32816 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 32875 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | | | || || || | || || ||||| Sbjct 32876 GACACGATCGATAATGTGAAGTCAAAGATTCAAG-ATAAAGAGGGAATTCCTCCTGACCA 32934 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | ||||| ||| || |||||| || Sbjct 32935 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAA 32994 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || ||||| || || Sbjct 32995 CATCCAGAAAGAGTCTAC 33012 >seq302 Length=43798 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 24659 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 24600 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 24599 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 24540 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| || || ||| | || || || ||||||| || ||||| || || Sbjct 24539 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 24480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760833492080