Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26]
999 sequences; 35,993,818 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq92 120 3e-22
seq245 93.3 4e-14
seq302 82.4 7e-11
>seq92
Length=85112
Score = 120 bits (132), Expect = 3e-22
Identities = 223/324 (69%), Gaps = 4/324 (1%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| |||||||| || || ||||| ||||| || || ||| || | || || ||| ||
Sbjct 68803 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTCTGGCTG 68744
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||| |||||||||| || || || ||||||| | || || || || |||
Sbjct 68743 AAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATGAG 68684
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA-TAAACCGACGC- 58158
|||||||| ||||| ||||| ||||| | | ||| ||| | ||| ||||| |
Sbjct 68683 GGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCGACCCT 68624
Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218
||| | | |||| ||||| || || ||| | || || || ||||| | || |
Sbjct 68623 CAGATTG--TGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTGACTG 68566
Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278
| || || || || | || || |||||| | ||||||| ||||||||||||
Sbjct 68565 ACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATTGAGT 68506
Query 58279 TTGTTGCCGACAGACTTTTGCTCG 58302
| || |||||| | || || |||
Sbjct 68505 TCGTCGCCGACCGTCTCCTGGTCG 68482
>seq245
Length=51786
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/204 (71%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || || || || |||||| | || ||||| | ||| | |||
Sbjct 32598 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCG 32657
Query 31263 A-AACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
| |||| | || || | ||| |||||| |||||| | || ||||||||||||||| |
Sbjct 32658 ACAACGTT--AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTT 32715
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| |||||||| || ||| | || ||| | ||| || || || |||||||| ||
Sbjct 32716 GATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAA 32775
Query 31381 AGAATCGACTCTTCATCTGGTACT 31404
||||| ||||| || |||| ||
Sbjct 32776 GGAATCTACTCTCCACTTGGTTCT 32799
Score = 89.7 bits (98), Expect = 5e-13
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| |||||||| || || || || || || | || |||||| | |||
Sbjct 32816 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 32875
Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| |||| | || || || ||| | | | || || || | || || |||||
Sbjct 32876 GACACGATCGATAATGTGAAGTCAAAGATTCAAG-ATAAAGAGGGAATTCCTCCTGACCA 32934
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||||||||| || ||||| ||||| ||| | ||||| ||| || |||||| ||
Sbjct 32935 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAA 32994
Query 31372 CATTCAAAAAGAATCGAC 31389
||| || ||||| || ||
Sbjct 32995 CATCCAGAAAGAGTCTAC 33012
>seq302
Length=43798
Score = 82.4 bits (90), Expect = 7e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
|||||| ||||| || || || || || || ||| |||||||||| || ||||| |
Sbjct 24659 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 24600
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | ||||| | || ||||||||| || | || |||||||||||||||||
Sbjct 24599 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 24540
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| ||||| || || ||| | || || || ||||||| || ||||| || ||
Sbjct 24539 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 24480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445760833492080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |