Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq245 109 1e-18 >seq245 Length=51786 Score = 109 bits (120), Expect = 1e-18 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||| || || || | || || || ||||| || ||||||||| Sbjct 32515 ATTCCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCA 32456 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || || || || || || ||||| || || || | ||| || |||||| Sbjct 32455 GAGAGGGTACGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGA 32396 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTC 104508 || || ||||| |||||||||||| ||||| || || || || | || ||||| | || Sbjct 32395 GGAATGCCTTCCTTATCCTGAATC-TTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTC 32337 Query 104509 TACCTCTAGTGTAATAGTCTTACCAGTAA 104537 ||||| | || || ||||| || |||| Sbjct 32336 GACCTCCAAAGTGATGGTCTTGCCGGTAA 32308 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||||||||| ||||| || || || | || || ||||| || || |||||||| Sbjct 33234 TCCTTCTGAATATTGTAGTCTGAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAG 33175 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || || || || || || || || || || || ||||||| || || || Sbjct 33174 ATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTG 33115 Query 104489 TCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 || | || || | || ||| || || | || |||||||| ||||| || || || || Sbjct 33114 TCGATAGTGTC-CGAGCTTTCAACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAAC 33056 Query 104548 AAATATCTGCAT 104559 || |||||||| Sbjct 33055 GAAGATCTGCAT 33044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151383662460292