Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq286 125 6e-24 >seq286 Length=46152 Score = 125 bits (138), Expect = 6e-24 Identities = 404/628 (64%), Gaps = 21/628 (3%) Strand=Plus/Minus Query 29777 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 29836 ||||||||||| | ||||| || || || || || || ||||||||||| || | | Sbjct 23050 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGGGTAT 22991 Query 29837 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 22990 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 22931 Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 22930 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 22871 Query 29957 GGTAGAGCTGACAC--GAGA----------GCTCT---CC------GTCGCTCACGTAAA 29995 |||||||||| || |||| | ||| || || | ||||| | Sbjct 22870 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 22811 Query 29996 ACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30055 |||| | | || || || || || ||||| | || ||||||||||| Sbjct 22810 ACTGGGCGAACATATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTCCAGG 22751 Query 30056 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30115 ||| || ||||||||| | ||| ||||| ||| | | || |||| | | | Sbjct 22750 CGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCGGCGA 22691 Query 30116 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30175 |||| || || || ||| |||||| | | ||| |||||| || ||||| | Sbjct 22690 GCTGGTCAACGCCTTGTCCCRTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCGAAGT 22631 Query 30176 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30235 | | ||| |||||||||||||| || ||||| || || | || | ||| || | ||| Sbjct 22630 GGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGGCCGA 22571 Query 30236 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGA 30295 |||||| | || || | | |||||| ||||||||||||| || || | ||||||| Sbjct 22570 CCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGA 22511 Query 30296 GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCC 30355 || ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 22510 GCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCGCGGA 22451 Query 30356 AAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| || |||||||| Sbjct 22450 GGAAGACGCGCTTGGTGGTCAGGAGGGG 22423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408612624953027