Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq245 89.7 4e-13 >seq245 Length=51786 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| || || |||||||| || | | | || | || || | |||||| ||||| || Sbjct 33007 CTCTTTCTGGATGTTGTAATCGGACAAAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 32948 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || ||||| || || | |||| ||||| || || ||||||| || ||| Sbjct 32947 AATGAGACGCTGCTGGTCAGGAGGAATTCCCTCTTTATCTTGAATCTTTGACTTCACATT 32888 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | || || | || ||||||| |||||| || ||||| || | ||| || || Sbjct 32887 ATCGATCGTGTCGGATGATTCAACCTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGAC 32828 Query 48755 AAAAATCTGCAT 48766 ||||||||||| Sbjct 32827 GAAAATCTGCAT 32816 Score = 82.4 bits (90), Expect = 6e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| |||| |||||||| || ||||||||||| || || || | || Sbjct 33261 AGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGTGCGT 33202 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || || || || || | ||||| |||||| Sbjct 33201 CCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCC 33142 Query 48669 TTGTC 48673 ||||| Sbjct 33141 TTGTC 33137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932961965677