Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq92 116 5e-21 seq3 109 7e-19 >seq92 Length=85112 Score = 116 bits (128), Expect = 5e-21 Identities = 281/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || ||||| |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 68376 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 68435 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 68436 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 68493 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||||||||||| | ||||| | |||||||| || | || | Sbjct 68494 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 68553 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 68554 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 68610 Query 122609 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | | | | ||| | || || | ||||||| ||||| | Sbjct 68611 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 68670 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||||||||||||||| || || ||||| || || ||||| ||||| ||||| | Sbjct 68671 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 68730 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 || |||||||||| ||| | |||| | ||| || |||||||||||||||||||| | Sbjct 68731 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAA 68790 Query 122786 CA 122787 || Sbjct 68791 CA 68792 >seq3 Length=211832 Score = 109 bits (120), Expect = 7e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 46835 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 46776 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| ||||| || Sbjct 46775 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 46716 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||| |||||| | || | || ||||| ||||| | | |||||| Sbjct 46715 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 46656 Query 111410 GCCTTCCA 111417 || | ||| Sbjct 46655 GCATACCA 46648 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 46535 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 46476 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 46475 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 46416 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 46415 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 46356 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 111712 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 46355 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 46299 Query 111713 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 46298 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 46239 Query 111767 ATACCAT 111773 ||||||| Sbjct 46238 ATACCAT 46232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024157450400