Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq92 154 2e-32 seq3 116 5e-21 >seq92 Length=85112 Score = 154 bits (170), Expect = 2e-32 Identities = 311/459 (68%), Gaps = 22/459 (5%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 68376 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 68435 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || ||||||||||| | |||| | | ||| || |||| |||| Sbjct 68436 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAAGAGCGACCAGGA 68490 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||||||||||| ||||| | ||||||||| || | || Sbjct 68491 GACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAG 68550 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || ||||| | |||| ||||||||||| ||||||||| ||||| Sbjct 68551 CGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCC---ACGATAA 68607 Query 129963 CGTGA---ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 ||| | ||| | | | || | ||| || | |||||| || | | Sbjct 68608 CGTCCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAG---CAGGCAAG 68664 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| || |||||||||||| ||||| ||||| || || || ||||| ||||| | Sbjct 68665 CAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGG 68724 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | || |||||||||| |||||| || | || || || ||||||||||| | Sbjct 68725 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATAC 68784 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||| ||| ||||| || | |||||||| | | |||| Sbjct 68785 CCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 68823 >seq3 Length=211832 Score = 116 bits (128), Expect = 5e-21 Identities = 576/909 (63%), Gaps = 26/909 (3%) Strand=Plus/Minus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| |||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 47541 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 47482 Query 118058 GATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 118114 || ||| |||||| | | | |||| | | |||||| | | ||||| ||||||| Sbjct 47481 GACGGAGCCACCCTC---GGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 47425 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 118171 | | |||| |||| || | ||||| || ||||||||||| ||| Sbjct 47424 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 47368 Query 118172 GCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 118231 || | ||||| || | ||||| ||||| |||||||| ||| |||||||| || Sbjct 47367 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 47308 Query 118232 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCT 118291 ||| || || |||||||| |||| || | |||||| || | ||| | | Sbjct 47307 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 47248 Query 118292 AATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATAT 118350 || | ||||||||||||||||| || || | || || | |||||| | Sbjct 47247 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 47189 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 47188 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 47129 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 ||| |||| || || || | ||| |||| || || || || || || | | Sbjct 47128 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 47069 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 || | ||| |||||| || || || | | || || || |||| | Sbjct 47068 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 47009 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | ||||| | |||||| || |||| ||||| || | ||| || ||| || || Sbjct 47008 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGC---CT 46952 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || || || |||| ||||||| | | | || || || | |||| Sbjct 46951 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGCACCTGCA 46892 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 118704 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 46891 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 46835 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 46834 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 46775 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 |||| || || | ||| || || || || |||| |||||| || || |||| ||| Sbjct 46774 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 46715 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| ||||||||||| |||||| | || | || ||||| || || | || ||||||| Sbjct 46714 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 46655 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 46654 CATACCAGA 46646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427477290440