Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq286 125 5e-24 >seq286 Length=46152 Score = 125 bits (138), Expect = 5e-24 Identities = 408/633 (64%), Gaps = 31/633 (5%) Strand=Plus/Minus Query 27116 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 27175 ||||||||||| | ||||| || || || || || || ||||||||||| || | | Sbjct 23050 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGGGTAT 22991 Query 27176 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 27235 | |||| || || ||||| || || | || | | ||||| ||||| | | Sbjct 22990 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCACAGCATGAGCAATCATATGGG 22931 Query 27236 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 27295 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 22930 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 22871 Query 27296 GGTAGAGCTGACAC--GAGA----------GCTCT---CCATCGCTT------ACGTAAA 27334 |||||||||| || |||| | ||| |||| | ||||| | Sbjct 22870 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 22811 Query 27335 ACTG-----ACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 |||| ||||||| | ||| ||||| ||||| | || |||||| Sbjct 22810 ACTGGGCGAACATATGACAAGGCG-GGAGG----GCCATCTTCTTGAGATCGGCGGGGTT 22756 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 |||||||| || ||||||||| | ||| ||||| ||| | | || |||| | | Sbjct 22755 CCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTC 22696 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||||| || || || ||| |||||| | ||| |||||| || || Sbjct 22695 GGCGAGCTGGTCAACGCCTTGTCCCRTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCC 22636 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 ||| || | |||||||||||||||||| || ||||| || || | || | ||| || | Sbjct 22635 GAAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAG 22576 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 ||| |||||| | || || | | |||||| ||||||||||||| || || | || Sbjct 22575 GCCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTC 22516 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||||||| ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 22515 GGAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGC 22456 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 ||||| | |||||| || |||||||| Sbjct 22455 GCGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 22423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369502701134369