Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576735.1_202016-02-26] 999 sequences; 35,993,818 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 214 3e-50 >seq3 Length=211832 Score = 214 bits (236), Expect = 3e-50 Identities = 598/910 (66%), Gaps = 16/910 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 46526 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 46467 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | | ||| || ||||| || | || || |||| || ||| || Sbjct 46466 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGAAG 46407 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| ||||| |||||||| | Sbjct 46406 AGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAG 46347 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || | || || || | | |||| || || || || |||||| Sbjct 46346 ACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCCC 46287 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || |||| ||||||||||||||| || | || | | ||| |||| ||| || || || Sbjct 46286 TGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGAG 46227 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGC 76877 | ||| || || ||| ||| || || ||||| || | | || | || | Sbjct 46226 GAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGAC 46169 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | ||||| || || | || ||||| | ||||| || | |||||||| || || | Sbjct 46168 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCTT 46109 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | || ||||| ||| |||| | | |||||| || || | ||| | ||| || | Sbjct 46108 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 46049 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||||| ||||| || || || ||||| ||||| | || | ||| | | | || | Sbjct 46048 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAGG 45989 Query 77058 TTTCAATAACTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACAT 77115 | || ||| | ||||| || |||| |||||| || |||| |||||||||||| | Sbjct 45988 TCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 45931 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 77175 |||||||| ||||| || ||| || || | ||||||||| || | ||| Sbjct 45930 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACCGCTCAAGAGT 45871 Query 77176 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGT 77233 || || || ||| ||||||| ||||| || | ||||| | |||| | || || ||| Sbjct 45870 CTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAGT 45813 Query 77234 TTGTCCTTATATTTGGTAACAATATCCATGACAGT--GGTAGAAATAATTGGAGATCGTA 77291 | ||| || ||| | || |||| || | | || || ||||| | || Sbjct 45812 TCGTCGGCATGTTTCATGAC--TATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 45755 Query 77292 TTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGttttt 77351 | ||| || || || | || | ||| |||| || || | ||| | || | Sbjct 45754 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 45695 Query 77352 ttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGAT 77411 |||||| |||||| || ||||| || ||||| | |||||| ||||| || ||||| |||| Sbjct 45694 TTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 45635 Query 77412 GTTGTGTAGT 77421 || ||||| Sbjct 45634 GTGTGGTAGT 45625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712925497231680