Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576745.1_202016-02-26] 999 sequences; 36,084,636 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq17 109 1e-18 seq315 98.7 2e-15 seq26 95.1 3e-14 >seq17 Length=179825 Score = 109 bits (120), Expect = 1e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 || ||||| ||| | |||||| |||| ||| ||| ||||||||||||| | | Sbjct 163291 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTG 163232 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | |||||||| || ||||| |||||||| | | |||| ||||| | | || Sbjct 163231 ATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAG 163172 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 | ||| ||| ||||| |||| ||| ||||| ||| || || || || || Sbjct 163171 TACTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACC 163112 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||||||| ||||||||| ||||||| || ||||||||||| Sbjct 163111 AACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 163064 >seq315 Length=40836 Score = 98.7 bits (108), Expect = 2e-15 Identities = 244/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Minus Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATT-TCTAGAAGATTAGGGAAACAGC 298145 ||| ||||||||||||| | | |||| | || || || | ||| | || | || Sbjct 17811 GATGGGCGTGATGAACTCGATGAGGAACTCGGGGATCCTCAACAAGCTCGGGAATTGGGC 17752 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 | || |||||||| |||| | ||| ||||||| || ||| |||| ||||||| Sbjct 17751 T-TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCA 17693 Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265 ||||||||| ||| || ||||| ||| || || |||| |||| | || | Sbjct 17692 TGATCATCAGATGTCCATAACGCAGCCCACGGGTATCCGTGTATTCTTTCTTGTGCTGCA 17633 Query 298266 GGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGAT 298324 || || | | ||||| | ||| ||||||| ||||||||| ||| | | | | Sbjct 17632 ACCCAAGGAAGTTTTTGATGTTCTG-GATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTG 17574 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||| ||||| |||| || ||||| || || ||||| || ||| | || ||||| Sbjct 17573 GCATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACCAAAGAGATCCGGACCG 17514 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||||| | | || || || || || | ||||| || || || |||||||| || Sbjct 17513 ACCACCGCACGTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAGT 17454 Query 298445 GTGCA 298449 ||||| Sbjct 17453 GTGCA 17449 >seq26 Length=156767 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| |||| || | ||||| |||||| || |||||||| || Sbjct 55764 TCGTGCTCAACGTAGACAGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 55705 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || ||||||||||| ||||| | ||||| | ||||| || || |||||||| Sbjct 55704 TTGTTGATAGCGCGCATGAGAGTGGTCTTACCAGTACCGTTGGGACCGAGGAGACCGTAA 55645 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | ||||||||||| || | || | |||||| | || || ||||||| ||| Sbjct 55644 CGCTGACCACGCTTCAGGCGGAGATGGGTCTGGTTCAGCAAGATCTTGGCACCATAGGCC 55585 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 55584 AGGGAGAACGTGCAGTTGCACAGATCCTCACC 55553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102865883480650