Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576745.1_202016-02-26] 999 sequences; 36,084,636 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq349 100 3e-16 >seq349 Length=34875 Score = 100 bits (110), Expect = 3e-16 Identities = 333/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Plus Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368 |||||| || || || ||||||||||||| |||| || || || || ||||| Sbjct 11227 GCTCTCCGACCAAGGCGTCAAGATCTGGGACGGCAACGGCAGCCGTGAGTTCCTCGACAA 11286 Query 34369 GCGGGGGTTC--CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGG 34426 | || | ||| | || ||| ||||| |||| || || ||||||||||| ||| Sbjct 11287 GGTCGGCCTGGACCACCGCG--AGGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAATGG 11344 Query 34427 AGACACTTTGGGGCGGAGTATCGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGA 34485 | ||||| ||||| ||||| || | | | || | ||||| ||||||| || | || Sbjct 11345 CGCCACTTCGGGGCCGAGTA-CGTCGACGCCAAAACCGACTACACGGGACAAGGCGTTGA 11403 Query 34486 CCAGCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGA 34544 |||||| || | | || | ||| ||||| ||||| ||| | | ||| | | Sbjct 11404 CCAGCTCGCCG-AGGTCGTGCACAAGCTGAAGAATAACCCCTTCGACCGCCGCATCATCA 11462 Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604 || |||| |||||||| |||||| |||||| ||||| || || || | || Sbjct 11463 TGAGCGCCTGGAACCCCGCCGATCTCAAGAAGATGGCCCTCCCGCCTTGTCATATGTTCG 11522 Query 34605 GCCAATTCTACGTCGC---------------------GAATGGGGAGCTGTCCTGCCAGC 34643 ||| ||||||||| | ||| || | || |||||||| Sbjct 11523 CCCAGTTCTACGTCTCCTACCCCAATGGCCAAGACCAGAAGGGTCATCTCCACTGCCAGC 11582 Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703 |||| || || ||| | ||| | | | || ||||||||||| ||||| ||||| | Sbjct 11583 TCTACCAGCGCTCGTGTGACGTCGCCCTCGGCGTGCCGTTCAATATTGCCTCCTACGCCC 11642 Query 34704 TGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGT 34763 | | || | ||||| ||||||| |||| || ||| || | || ||| | Sbjct 11643 TCTTGACCCATATGATTGCTCATGCTGTGGACCTGCATCCCGGTACCTTTGTTCATGCCA 11702 Query 34764 TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 |||| ||| | ||| |||||||| |||| ||||| Sbjct 11703 TGGGTGATACCCATGTCTACCTGGACCATGCCGAGC 11738 Score = 100 bits (110), Expect = 3e-16 Identities = 333/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Minus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 ||||| |||| |||||||| ||| | ||| |||| | ||| || | || ||| Sbjct 11738 GCTCGGCATGGTCCAGGTAGACATGGGTATCACCCATGGCATGAACAAAGGTACCGGGAT 11679 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || |||| ||||||| ||||| | || | || ||||| ||||| ||||||| Sbjct 11678 GCAGGTCCACAGCATGAGCAATCATATGGGTCAAGAGGGCGTAGGAGGCAATATTGAACG 11619 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC- 6724 |||| || | | | ||| | ||| || || |||||||||||| || | || ||| Sbjct 11618 GCACGCCGAGGGCGACGTCACACGAGCGCTGGTAGAGCTGGCAGTGGAGATGACCCTTCT 11559 Query 6725 --------------------GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCG 6764 | ||||||||| ||| || | || || || ||||| | Sbjct 11558 GGTCTTGGCCATTGGGGTAGGAGACGTAGAACTGGGCGAACATATGACAAGGCGGGAGGG 11499 Query 6765 CCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGT 6824 ||||| |||||| |||||||| |||| ||| | ||| | | ||| |||| Sbjct 11498 CCATCTTCTTGAGATCGGCGGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGT 11439 Query 6825 TCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCC 6883 | ||||| ||| | || | | || |||||||| | || ||||||| ||||| Sbjct 11438 TATTCTTCAGCTTGTGCACGACCT-CGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCG 11380 Query 6884 GCTTCG-CTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 | || | | | || ||||| ||||| ||||| | ||| ||||||||||| || || || Sbjct 11379 GTTTTGGCGTCGACG-TACTCGGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACC 11321 Query 6943 CAAGTCGCCCTCCTCCCGAGATGG--GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000 || ||||| ||| || | ||| | || |||||| || || || || ||| Sbjct 11320 CAGATCGCCGACCT--CGCGGTGGTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCG 11263 Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGC 7036 | ||||||||||||| || || || |||||| Sbjct 11262 TTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGAGC 11227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448256802323280