Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576745.1_202016-02-26] 999 sequences; 36,084,636 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq349 125 5e-24 >seq349 Length=34875 Score = 125 bits (138), Expect = 5e-24 Identities = 231/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 |||||||||||||| || ||||||||| | ||| ||||| ||| | | || ||| Sbjct 11479 GGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCAC 11420 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTC 27503 | | | ||||| || || || |||| |||||| | ||| |||||| Sbjct 11419 GACCTCGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTC 11360 Query 27504 TGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 27563 || ||||| || | |||||||||||||||||| || ||||| || || | || | ||| Sbjct 11359 GGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTG 11300 Query 27564 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 27623 || | ||| |||||| | || || | | |||||| ||||||||||||| || || Sbjct 11299 GTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCC 11240 Query 27624 CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCAC 27683 | ||||||||| ||| ||| | || || |||||| ||||| || | || Sbjct 11239 TTGGTCGGAGAGCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGAC 11180 Query 27684 GACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 |||||| ||||| | |||||| || |||||||| Sbjct 11179 GACGGCGCGGAGGAAGACGCGCTTGGTGGTCAGGAGGGG 11141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369502701134369