Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576795.1_202016-02-26] 670 sequences; 36,578,698 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq21 120 3e-22 seq121 93.3 4e-14 seq1 82.4 7e-11 >seq21 Length=316773 Score = 120 bits (132), Expect = 3e-22 Identities = 223/324 (69%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || || ||| || | || || ||| || Sbjct 300462 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTTCTGGCTG 300403 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| |||||||||| || || || ||||||| | || || || || ||| Sbjct 300402 AAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCGTGATGAG 300343 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAA-TAAACCGACGC- 58158 |||||||| ||||| ||||| ||||| | | ||| ||| | ||| ||||| | Sbjct 300342 GGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCGCACCTGAACAACCGCCCCGACCCT 300283 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||| | | |||| ||||| || || ||| | || || || ||||| | || | Sbjct 300282 CAGATTG--TGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAGGAGTTCCTGACTG 300225 Query 58219 AAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGT 58278 | || || || || | || || |||||| | ||||||| |||||||||||| Sbjct 300224 ACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGCCAGTACATTGAGT 300165 Query 58279 TTGTTGCCGACAGACTTTTGCTCG 58302 | || |||||| | || || ||| Sbjct 300164 TCGTCGCCGACCGTCTCCTGGTCG 300141 >seq121 Length=119742 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/204 (71%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || || || || |||||| | || ||||| | ||| | ||| Sbjct 90132 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCG 90191 Query 31263 A-AACGGTCAAACAG-AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 | |||| | || || | ||| |||||| |||||| | || ||||||||||||||| | Sbjct 90192 ACAACGTT--AAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTT 90249 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || ||| | ||| || || || |||||||| || Sbjct 90250 GATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAA 90309 Query 31381 AGAATCGACTCTTCATCTGGTACT 31404 ||||| ||||| || |||| || Sbjct 90310 GGAATCTACTCTCCACTTGGTTCT 90333 Score = 89.7 bits (98), Expect = 5e-13 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| |||||||| |||||||| || || || || || || | || |||||| | ||| Sbjct 90350 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 90409 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || ||| | | | || || || | || || ||||| Sbjct 90410 GACACGATCGATAATGTGAAGTCAAAGATTCAAG-ATAAAGAGGGAATTCCTCCTGACCA 90468 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || ||||| ||||| ||| | ||||| ||| || |||||| || Sbjct 90469 GCAGCGTCTCATTTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTTTGTCCGATTACAA 90528 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| || ||||| || || Sbjct 90529 CATCCAGAAAGAGTCTAC 90546 >seq1 Length=714140 Score = 82.4 bits (90), Expect = 7e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| || || || || || || ||| |||||||||| || ||||| | Sbjct 527079 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 527020 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || ||||||||||||||||| Sbjct 527019 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCT 526960 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || ||||| || || ||| | || || || ||||||| || ||||| || || Sbjct 526959 GATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 526900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762666706400