Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001576795.1_202016-02-26] 670 sequences; 36,578,698 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq386 125 5e-24 seq11 105 4e-18 seq121 104 2e-17 >seq386 Length=1149 Score = 125 bits (138), Expect = 5e-24 Identities = 80/87 (92%), Gaps = 5/87 (6%) Strand=Plus/Plus Query 25901 TAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCG 25955 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 80 TAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCG 139 Query 25956 TTAATCCTTTCATGCGCGTCACTAATT 25982 ||||||| ||||||||||||||||||| Sbjct 140 TTAATCCATTCATGCGCGTCACTAATT 166 >seq11 Length=412627 Score = 105 bits (116), Expect = 4e-18 Identities = 227/337 (67%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 6157 CCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAA 6216 |||| |||| ||| | ||| | ||| |||| | || | ||||| || ||||| | Sbjct 175735 CCACCATGGCTACCGTCAACATTCGTCGGGATGTTACCGATCCCTTCTATCGTTACAAGA 175676 Query 6217 TGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGT 6274 || |||| |||| ||||| ||||||| ||||| ||||| || || |||||| |||| Sbjct 175675 TGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAACGGAATCAAGACCGTCGTTGT 175618 Query 6275 CAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAAT 6330 |||| || || |||||| || | || | ||| ||| || | ||| || || | Sbjct 175617 CAAC----CTCAACTCGGTCGCTCAGTCCCTTGCACGTCCTCCCGCATACGTGATCAAGT 175562 Query 6331 ATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCG 6390 | ||||| | ||| |||||||||||| | | | | | | || |||| ||| Sbjct 175561 ACTTCGGTTTCGAGCTTGGCGCTCAGGCCAACGCCAAGCCGACCGATGACCGCTGGATCA 175502 Query 6391 TTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 | ||||| | || | | |||||||| ||||| | |||||||| || ||| ||| | Sbjct 175501 TCAACGGCGCCCACGATGCCGCCAAGCTCCAGGATTATCTTGACGGATTCATTTCCAAAT 175442 Query 6451 TTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || || || | | ||| | ||||| || ||||| Sbjct 175441 TCGTTCTTTGCAAGAAGTGCAAGAACCCTGAAACCGA 175405 >seq121 Length=119742 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||||| ||||| || | ||||||||||| ||||||||||| || Sbjct 90807 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 90748 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || |||| || || || ||||| || || ||||| || || | | Sbjct 90747 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 90688 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| || ||| ||| || || | || ||| || |||||| Sbjct 90687 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCA 90628 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||| || || || | || || ||||| |||||||| Sbjct 90627 ACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 90578 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 90350 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 90291 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | || || || || || || | || || || |||| || Sbjct 90290 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 90231 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| ||||| ||| || || | || ||||| | |||| Sbjct 90230 GAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 90171 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATA 38310 | || | || ||||| || || || | ||| ||||||| || Sbjct 90170 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGACTA 90129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944464946770