Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq273 221 1e-52 >seq273 Length=19895 Score = 221 bits (244), Expect = 1e-52 Identities = 601/910 (66%), Gaps = 15/910 (2%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 ||||| ||||| || |||||| | |||| ||||| || | ||||| | | | | Sbjct 12808 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 12749 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 54069 || || |||| | | ||||| ||||| || | || ||| |||| || || ||| || Sbjct 12748 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 12690 Query 54070 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 54129 ||||| | || ||| |||||| || || ||||| |||||||||||| | | Sbjct 12689 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 12630 Query 54130 AATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCC 54189 | ||| | ||||| || |||||||| |||| | | | || || || ||||||||||| Sbjct 12629 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 12570 Query 54190 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 54249 ||| |||| ||||| || ||||| || | || | | ||| |||| |||||||||||| Sbjct 12569 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 12510 Query 54250 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 54307 | ||| ||||| || || ||| || | ||||| || | | |||| ||| Sbjct 12509 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 12452 Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367 || || || || || | || ||||| ||||| ||| || | ||| ||||| || || Sbjct 12451 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 12392 Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427 || || ||||| ||| |||| | | ||||| || || | || | || || Sbjct 12391 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 12332 Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487 || ||||| || || || || || || || || || | || | ||| | | | || Sbjct 12331 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 12272 Query 54488 GTCTCGATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 54545 ||||||||||| ||| || |||| |||||| || || | ||||||||| || | Sbjct 12271 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 12214 Query 54546 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGA-TTTTTCCAAA 54604 ||||||||| | |||| | | ||| | || |||||||| || || | | Sbjct 12213 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACACGCTCAAGA 12154 Query 54605 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662 || || || || ||| ||||||| ||||| || || ||||| | |||| | ||||||| Sbjct 12153 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGA 12096 Query 54663 GTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTT 54722 ||| || || ||| | |||| || || |||| || || || | | ||| Sbjct 12095 GTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 12036 Query 54723 TCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttttt 54782 || ||| || || |||| || | ||| || || || ||| | || | Sbjct 12035 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 11976 Query 54783 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 54842 |||||| ||||| || || || || ||||| | ||| || |||||||| || || |||| Sbjct 11975 TTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 11916 Query 54843 GTTGTGTAGT 54852 || ||||| Sbjct 11915 GTGTGGTAGT 11906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593673931577040