Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq581 104 2e-17 seq1162 96.9 2e-15 >seq581 Length=14361 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||||| ||||| || | ||||||||||| ||||||||||| || Sbjct 7614 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 7555 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || |||| || || || ||||| || || ||||| || || | | Sbjct 7554 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 7495 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| || ||| ||| || || | || ||| || |||||| Sbjct 7494 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCA 7435 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||| || || || | || || ||||| |||||||| Sbjct 7434 ACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 7385 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 7157 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 7098 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | || || || || || || | || || || |||| || Sbjct 7097 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 7038 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| ||||| ||| || || | || ||||| | |||| Sbjct 7037 GAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 6978 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATA 38310 | || | || ||||| || || || | ||| ||||||| || Sbjct 6977 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGACTA 6936 >seq1162 Length=9681 Score = 96.9 bits (106), Expect = 2e-15 Identities = 225/337 (67%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 6157 CCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAA 6216 |||| |||| ||| | ||| | ||| |||| | || | ||||| || ||||| | Sbjct 5777 CCACCATGGCTACCGTCAACATTCGTCGGGATGTTACCGATCCCTTCTATCGTTACAAGA 5718 Query 6217 TGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGT 6274 || |||| |||| ||||| | ||||| ||||| || || || || |||||| |||| Sbjct 5717 TGGAGCGC--CTGCAGTCCAAGATTGAGGGCAAGGGCAATGGAATCAAGACCGTCGTTGT 5660 Query 6275 CAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAAT 6330 |||| || || |||||| || | || | ||| ||| || | ||| || || | Sbjct 5659 CAAC----CTCAACTCGGTCGCTCAGTCCCTTGCACGTCCTCCCGCATACGTGATCAAGT 5604 Query 6331 ATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCG 6390 | ||||| | ||| |||||||||||| | | | | | | || |||| ||| Sbjct 5603 ACTTCGGTTTCGAGCTTGGCGCTCAGGCCAACGCCAAGCCGACCGATGACCGCTGGATCA 5544 Query 6391 TTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 | ||||| | || | | |||||||| ||||| | |||||||| || ||| ||| | Sbjct 5543 TCAACGGCGCCCACGATGCCGCCAAGCTCCAGGATTATCTTGACGGATTCATTTCCAAAT 5484 Query 6451 TTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || || || | | ||| | ||||| || ||||| Sbjct 5483 TCGTTCTTTGCAAGAAGTGCAAGAACCCTGAAACCGA 5447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334920980228513