Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27]
6,423 sequences; 35,784,535 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq273 212 8e-50
>seq273
Length=19895
Score = 212 bits (234), Expect = 8e-50
Identities = 599/910 (66%), Gaps = 15/910 (2%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| || ||||| || |||||| | ||| ||||| || | ||||| | | | |
Sbjct 12808 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 12749
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AA 63111
|| || |||| | | ||||| ||||| || | || ||| |||| || || ||| ||
Sbjct 12748 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 12690
Query 63112 TAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 63171
||||| | || ||| |||||| || || ||||| |||||||||||| | |
Sbjct 12689 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 12630
Query 63172 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231
| ||| | ||||| || |||||||| ||||| | | | || || || |||||||||||
Sbjct 12629 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 12570
Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291
||| |||| ||||| || ||||| || | || | | ||| |||| ||||||||||||
Sbjct 12569 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 12510
Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 63349
| ||| ||||| || || ||| || | ||||| || | | |||| |||
Sbjct 12509 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 12452
Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 63409
|| ||||| || || | || ||||| ||||| ||| || | ||| ||||| || ||
Sbjct 12451 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 12392
Query 63410 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 63469
|| || ||||| ||| |||| | | ||||| || || | || | || ||
Sbjct 12391 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 12332
Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTAC 63529
|| ||||| || || || || || || || || || | || | ||| | | | ||
Sbjct 12331 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 12272
Query 63530 GTCTCAATAGCTGAGTCTATATCCCATT--GATGAATTCCTACTGCGACACGCATTAACA 63587
||||| ||||| ||| || |||| |||||| || || | ||||||||| || |
Sbjct 12271 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 12214
Query 63588 TGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGA-TTTTTCCAAA 63646
||||||||| | |||| | | ||| | || | |||||| || || | |
Sbjct 12213 GGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACACGCTCAAGA 12154
Query 63647 GTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704
|| || || || ||| ||||||| ||||| || || ||||| | |||| | |||||||
Sbjct 12153 GTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGA 12096
Query 63705 GTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTT 63764
||| || || ||| | |||| || || |||| || || || | |||
Sbjct 12095 GTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGTT 12036
Query 63765 TCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttt 63824
|| ||| || || |||| || | | ||| || || || ||| | || |
Sbjct 12035 TCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTCT 11976
Query 63825 ttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGAT 63884
|||||| ||||| || || || || ||||| | ||| || |||||||| || || ||||
Sbjct 11975 TTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGAT 11916
Query 63885 GTTGTGTAGT 63894
|| |||||
Sbjct 11915 GTGTGGTAGT 11906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633581127270800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |