Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq273 141 3e-28 seq21 98.7 3e-15 seq45 93.3 1e-13 seq288 89.7 2e-12 >seq273 Length=19895 Score = 141 bits (156), Expect = 3e-28 Identities = 370/560 (66%), Gaps = 6/560 (1%) Strand=Plus/Minus Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACT-CCTCATCGCCGTGATTCTTCCGTAGCTCTAA 156001 |||||||| || || | || | | ||| |||| | ||||| ||||| || || || | Sbjct 12697 GCATAGAAGAGATCGCGGGC-TCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAG 12639 Query 156002 GAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT 156061 ||| || | ||| | || ||||||| || || |||||| ||| | ||| Sbjct 12638 GAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTT 12579 Query 156062 G---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAAT 156118 | || ||||| |||||||| | ||||| || ||||| || | ||||| |||| ||| Sbjct 12578 GTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAAT 12519 Query 156119 ACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAAT 156178 ||||||||| | || ||||| || | ||| | || || | | || | || | Sbjct 12518 ACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCAC 12459 Query 156179 ATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAA 156238 || || || || ||||| | || || || || ||| ||| | || | | Sbjct 12458 ATTGAGACCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATA 12399 Query 156239 AATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCG 156298 ||||||||| || ||| || | ||| | ||| |||| ||| | ||||| | Sbjct 12398 AATACCTTCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTG 12339 Query 156299 TGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATA 156358 || || ||||| ||||| | || || | ||||| | |||||||| | |||||| | Sbjct 12338 AGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAA 12279 Query 156359 ATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCAT 156418 | || ||||| || |||||||| | | || ||||||| | |||||| | ||| Sbjct 12278 GTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCAT 12219 Query 156419 CCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATG-CGCGTT 156477 | | | ||||||||||| || ||| | ||||||||| || || | ||||| | || | Sbjct 12218 CAAAAGGTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACACGCT 12159 Query 156478 CCAGAGTTTTAAACCCGAAA 156497 | ||||| || || |||||| Sbjct 12158 CAAGAGTCTTGAAGCCGAAA 12139 >seq21 Length=39555 Score = 98.7 bits (108), Expect = 3e-15 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 302596 CGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCA 302655 ||||| |||||||| ||| | || || |||||||||||||| ||||| |||||||| Sbjct 17200 CGCTGGATATAACCGGTTTCTGCGGTCTTGACAGCTGTATCAATAAGACCCTCACGACCA 17259 Query 302656 CCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATAAAGGAGCTCTCAA 302713 |||| || |||||||| | ||| ||| || |||| | ||| ||||| |||| | Sbjct 17260 GCCATGGCGTGGAAGAAAAACTCAGTGGGT-GTCAAGCCACGCAA-GTAGGAGTTCTCCA 17317 Query 302714 CGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCT 302773 | |||||||| | || || || | ||| ||| || || || |||| || | | || Sbjct 17318 CAAAACCACGGGATTCTGGAGAGTAGTCATCCTTTGTGAAATGGGGCAAAGTACGATACT 17377 Query 302774 CATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCT 302833 | ||| | |||||||| || || || ||| || || |||| | | | |||||| Sbjct 17378 TGAAACCGAACGGGATACGTTTACCCTCGACGGATTGTTGACCCACGACAGCAGTCATCT 17437 Query 302834 GCGAAATATT 302843 | || || || Sbjct 17438 GGGATATGTT 17447 Score = 93.3 bits (102), Expect = 1e-13 Identities = 103/137 (75%), Gaps = 3/137 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||| Sbjct 16402 AGAATTTCCTTCAGACGAGGGACACCAAGTGTAACGTT---CTTGGACGAGACACCAGCA 16458 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 || |||||||| || ||||| | || |||| |||||| |||||| || || || | Sbjct 16459 AAATGGAAAGTGTTTAGAGTCATCTGCGTAGCTGGCTCTCCAATAGACTGGGCAGCGAGA 16518 Query 301933 ATACCAACCATTTCTCC 301949 | ||||||||| || || Sbjct 16519 ACACCAACCATCTCACC 16535 >seq45 Length=33527 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 233276 CCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATTTGAC 233335 |||| ||||||| ||| ||||||||||| ||||| | ||| |||||||| ||| || Sbjct 14508 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 14449 Query 233336 CTACCCTGGACTGTT---TGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATTA 233392 | ||||| ||||| |||||||| | | || || ||||| | |||||| ||| Sbjct 14448 CGACCCT---CTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGC 14392 Query 233393 ATTTTATCTTTAACCATATGCTTCAG 233418 || ||||||| |||||| ||||| || Sbjct 14391 ATCTTATCTTGAACCATGTGCTTGAG 14366 Score = 86.0 bits (94), Expect = 2e-11 Identities = 122/172 (71%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 251488 CCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCC 251547 |||| | ||||| ||| ||||| ||||| ||||| | ||| |||||||| || || | Sbjct 14508 CCGTAGGCAATCAGACAGTCACGTTCCATCTCACCTAGACGGAGACCACCGTCACGGGAA 14449 Query 251548 CTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGC 251607 | |||||| | ||||||||||| || || | |||||| || || ||| | Sbjct 14448 CGACCCTCTGTTGGCTGACGAGTAAGTATAGCTCGAGGACCACGGGCACGAGAATGCATC 14389 Query 251608 TTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||||| | ||||| |||||||| ||||||| | |||||| |||||| Sbjct 14388 TTATCTTGAACCATGTGCTTGAGCTTCTGGTAGTAGATAGGACCGGTGAAGA 14337 >seq288 Length=19583 Score = 89.7 bits (98), Expect = 2e-12 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA-CAAGCGTGCG 133495 ||||||| ||| ||||| ||||||||||||| ||||||||||| || | || || Sbjct 10874 TTCCTTGCATTCGTAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGT-CG 10816 Query 133496 AGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCG 133555 | || | | |||||||| || || || | || ||||| || || ||| || | Sbjct 10815 ACCTTCGGTCAGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCC 10756 Query 133556 TTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAAC 133615 ||| |||||| || ||||| || |||||||| | | || || || || || ||| Sbjct 10755 TTCGCCTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAAC 10696 Query 133616 GAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 || ||||| || | || |||| || ||||| || ||||| Sbjct 10695 GAGCTTATCTCTCGTGATGAGGGTCTCCACACTGACTTTGC 10655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471696477230551