Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq273 154 2e-32 >seq273 Length=19895 Score = 154 bits (170), Expect = 2e-32 Identities = 608/941 (65%), Gaps = 29/941 (3%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 12808 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 12749 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | | | |||||| ||||| || | || ||| |||| || || ||| || Sbjct 12748 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 12690 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | || ||| ||| || || || || || |||||||| ||||| | Sbjct 12689 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 12630 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| | ||||| || || | || || || | | || || || || |||||||| Sbjct 12629 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 12570 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 12569 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 12510 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||| || || ||| ||| || || | || || || | | || | ||| Sbjct 12509 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 12452 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | ||||| || | |||||||| ||||| Sbjct 12451 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 12392 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | |||||| || || | ||| | || || Sbjct 12391 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 12332 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 12331 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 12272 Query 70054 GTTTCAATAGCTGATTCTATATCCCACT--GATGAATTCCTATCGCGACACGCATCAACA 70111 || || ||||| |||| || || | |||||| || | | |||||||||||| | Sbjct 12271 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 12214 Query 70112 TATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGA-TTTTTCC 70167 |||||||| |||| | ||| || || | || | || |||||| || Sbjct 12213 GGTGCTGAGGACGTTCAGCAACCTTTCCATCA---ATCCGAAGCAAGTATGACACGCTCA 12157 Query 70168 AGAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAAT 70225 ||||| || || || ||| ||||||| ||||| || | ||||| | |||| | || | Sbjct 12156 AGAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGT 12099 Query 70226 TTAGTTTATCCTTATATTTGGTAACTATATC---CATAACAGTAGGTGAGATAATCGGAG 70282 | |||| || || ||| | ||||| || | | | | ||| || || || | Sbjct 12098 TGAGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTT---TGATATCATTGGGG 12042 Query 70283 ATCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATA 70342 |||| ||| || || || | || | | ||| ||| || || ||| Sbjct 12041 CAGGTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATT 11982 Query 70343 GtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGT 70402 | || ||||||| |||||| | || || | ||||| | || || ||||| || |||| Sbjct 11981 GCTTCTTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGT 11922 Query 70403 CAGGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 | |||||| ||||| || ||| || || | || ||||| Sbjct 11921 CTGGATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 11882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686853649809720