Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq288 116 5e-21 seq273 109 7e-19 >seq288 Length=19583 Score = 116 bits (128), Expect = 5e-21 Identities = 281/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 || || ||||| |||||||| |||||||||||||| || | ||| ||||| ||||| Sbjct 10367 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 10426 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCA--AATGGGTGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||||||||| || | || || | | | | || || || ||||||| Sbjct 10427 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTGCC--AAGAGCGACCAGGAGAC 10484 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||||||||||| | ||||| | |||||||| || | || | Sbjct 10485 GGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGC 10544 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || ||||| | |||| | |||||||| || || || |||||| ||| Sbjct 10545 AAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTC---CACGATAACGT 10601 Query 122609 GG---ATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACT 122665 | | | | | ||| | || || | ||||||| ||||| | Sbjct 10602 CCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGT 10661 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||||||||||||||| || || ||||| || || ||||| ||||| ||||| | Sbjct 10662 CAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCA 10721 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 || |||||||||| ||| | |||| | ||| || |||||||||||||||||||| | Sbjct 10722 AGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAA 10781 Query 122786 CA 122787 || Sbjct 10782 CA 10783 >seq273 Length=19895 Score = 109 bits (120), Expect = 7e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||| | || || | ||||| ||||| ||||||| | | |||||||| | Sbjct 13117 GGCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATG 13058 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| ||||| | |||||| || ||||| |||| ||||| ||||| ||||| || Sbjct 13057 ATTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTG 12998 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 || || ||||||||||| |||||| | || | || ||||| ||||| | | |||||| Sbjct 12997 TTACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATA 12938 Query 111410 GCCTTCCA 111417 || | ||| Sbjct 12937 GCATACCA 12930 Score = 84.2 bits (92), Expect = 3e-11 Identities = 203/307 (66%), Gaps = 9/307 (3%) Strand=Plus/Minus Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 ||||| || ||||| || ||||| | |||| | || || |||| || |||||| Sbjct 12817 TAGAGTGCCTCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAG 12758 Query 111533 AAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 111592 || |||| ||| | || | ||||| ||||||||||| | ||| ||| |||| ||| Sbjct 12757 AAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGG 12698 Query 111593 GATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGG 111652 | | |||||||| | | | || || | ||| ||||| || | || ||| Sbjct 12697 GCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGG 12638 Query 111653 AACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC 111712 ||||| | || ||| |||||||| ||||| | || | || | || || | ||||| Sbjct 12637 AACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACC---TGGACGC 12581 Query 111713 ------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATA 111766 || | || | |||||| | || ||| ||| || || || ||||| |||| | Sbjct 12580 TTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACA 12521 Query 111767 ATACCAT 111773 ||||||| Sbjct 12520 ATACCAT 12514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627981576880800