Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq288 154 2e-32 seq273 116 5e-21 >seq288 Length=19583 Score = 154 bits (170), Expect = 2e-32 Identities = 311/459 (68%), Gaps = 22/459 (5%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || || ||||||||||||||||| ||||| ||| ||| | ||| || ||||| Sbjct 10367 TAATCACCGACACGCTTCTCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATG 10426 Query 129788 AAATCAAATGGGTT-----CTTTGAGTTCCAAATTGCTGGCACTCCAATCTGTTTGAGGA 129842 || ||||||||||| | |||| | | ||| || |||| |||| Sbjct 10427 AAGTCAAATGGGTTGGTGGCATTGAAGTACTTGTTGTTG-----CCAAGAGCGACCAGGA 10481 Query 129843 GACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGT 129902 |||| || | |||| |||||||||||| ||||| | ||||||||| || | || Sbjct 10482 GACGGTCGGCGACGAACTCAATGTACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAG 10541 Query 129903 TACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGG 129962 || || || ||||| | |||| ||||||||||| ||||||||| ||||| Sbjct 10542 CGCAAGGAAGAGCGTCAGTCAGGAACTCCTTCTCAATGGAGACAGCTTCC---ACGATAA 10598 Query 129963 CGTGA---ATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---G 130016 ||| | ||| | | | || | ||| || | |||||| || | | Sbjct 10599 CGTCCTCCACAATCTGAGGGTCGGGGCGGTTGTTCAGGTGCGAGAAGAG---CAGGCAAG 10655 Query 130017 CAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 130076 |||| || |||||||||||| ||||| ||||| || || || ||||| ||||| | Sbjct 10656 CAAAGTCAGTGTGGAGACCCTCATCACGAGAGATAAGCTCGTTGGAGAATGTAAGACCGG 10715 Query 130077 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 130136 |||| | || |||||||||| |||||| || | || || || ||||||||||| | Sbjct 10716 GCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATAC 10775 Query 130137 CCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 |||| ||| ||||| || | |||||||| | | |||| Sbjct 10776 CCTCAACAGCGGCGAAGGCCACGAGACGCTGACCGAAGG 10814 >seq273 Length=19895 Score = 116 bits (128), Expect = 5e-21 Identities = 576/909 (63%), Gaps = 26/909 (3%) Strand=Plus/Minus Query 117998 GATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 118057 ||| |||||||||||| |||||||| ||| ||||| | ||||| | ||| || || Sbjct 13823 GATCTCCCACACAGTCTTGTAGAGGGCCTTGATATCCGCGGGGATGTTAGGGATGTTCTG 13764 Query 118058 GATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAAT 118114 || ||| |||||| | | | |||| | | |||||| | | ||||| ||||||| Sbjct 13763 GACGGAGCCACCCTC---GGCAATGATACGGTTCTTCATGTTGTCCGACCACAGACCAAG 13707 Query 118115 CTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAACAAACTCACCCGCGAGGGT 118171 | | |||| |||| || | ||||| || ||||||||||| ||| Sbjct 13706 GTCGACCAAGTCCTT---GAGAAGCCAAGGGTTGACGACCTGGAACTCACCCGCAAGGAC 13650 Query 118172 GCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTG 118231 || | ||||| || | ||||| ||||| |||||||| ||| |||||||| || Sbjct 13649 ACGGCGGGAGTAGATGTTCGAGGTGTAAGGCTCGAAGCACTCGTTGAAGCCCAAGATCTG 13590 Query 118232 GGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCT 118291 ||| || || |||||||| |||| || | |||||| || | ||| | | Sbjct 13589 ACTGGTGCTTGCGGTCGGCATGGGCGCCACTAGCAAGCTGTTGCGCACACCGGTCTGGGC 13530 Query 118292 AATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATAT 118350 || | ||||||||||||||||| || || | || || | |||||| | Sbjct 13529 GATCTTCGCTTTGAGAGCGTCCCAGTCCCAGA-GATCAGTGGGGGTCCGGTCCCACATGT 13471 Query 118351 CAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAA 118410 | |||| || || || ||||| | || || || ||| ||| ||| || | || Sbjct 13470 CGTACTGAAGAATGCCCTGGGAGACGGGAGAGCCTTCATATGACTCGTACGTTCCGAAGT 13411 Query 118411 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAG 118470 ||| |||| || || || | ||| |||| || || || || || || | | Sbjct 13410 CCTTGGCCAGGTCAGATGAAGCAGTCAAAGCTCCGTGGTAGATGGTCTCGAAGATTTGGG 13351 Query 118471 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 118530 || | ||| |||||| || || || | | || || || |||| | Sbjct 13350 TGTTTAGCTGCTTCGCCTCGGGTGAGTCGAATGGCAAACGAAGGGCAAGGAAGGCATCAG 13291 Query 118531 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCT 118590 | ||||| | |||||| || |||| ||||| || | ||| || ||| || || Sbjct 13290 CCAGACCATTGACACCAAGAGCAATGGGGCGGTGACGCATGTTGCTGTTCTTGGC---CT 13234 Query 118591 CC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTG 118647 | || || || |||| ||||||| | | | || || || | |||| Sbjct 13233 CAGGGACAGGGTAGTAATTGATATCGATGATCTTGTTCAGGTTACGAACCAGCACCTGCA 13174 Query 118648 TGATTTCATGAAGCTTTTCGTAATCAAA---ACTGCGAGTCTCTTCATTGACATACTTAG 118704 | ||| || ||||| | | ||| | || ||| | | ||| || | | | Sbjct 13173 CAACTTCGTGGAGCTTGCCAAAGTCATATTCACCGCGGGCAGCATCAACGA---AGGTGG 13117 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | ||||| | || || || || || |||| ||||||| | |||||||||| || | Sbjct 13116 GCAGGGCAAGAGAGGCAAGGTTGCAGACAGCAACCTCATCCGGAGCAGTGTACTCAATGA 13057 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 |||| || || | ||| || || || || |||| |||||| || || |||| ||| Sbjct 13056 TTTCAGTACAGAGGTTGGAGCTGCGGATCGTTCCCAGGTTCTTCTGGTTGCTCTTTCTGT 12997 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 |||| ||||||||||| |||||| | || | || ||||| || || | || ||||||| Sbjct 12996 TACAGGCATCCTTGTACAGCATGAAAGGATTTCCAGTCTCGGTCTGAGCCTCCAGAATAG 12937 Query 118885 CCTTCCAGA 118893 | | ||||| Sbjct 12936 CATACCAGA 12928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618385547383880