Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq288 170 2e-37 seq581 154 2e-32 seq10 132 5e-26 seq300 111 2e-19 seq273 111 2e-19 >seq288 Length=19583 Score = 170 bits (188), Expect = 2e-37 Identities = 346/508 (68%), Gaps = 27/508 (5%) Strand=Plus/Minus Query 64662 TAAAAAGGCTGAATGGGCCATCCGGTGGAT---GAATCGTGGGTCGTCGTTTGGTCAGCG 64718 ||| |||||||| ||||| ||||| ||||| | ||| | |||| | || |||||||| Sbjct 10861 TAAGAAGGCTGACTGGGCTATCCGCTGGATCCAGGATCAGGAGTCGACCTTCGGTCAGCG 10802 Query 64719 TCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTT 64778 ||||| || || ||| ||| || || || ||||| || || || ||| ||||| || Sbjct 10801 TCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTATCTT 10742 Query 64779 CTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCG 64838 |||||| || ||||| ||| ||||||| ||||| | || || |||||||| |||||||| Sbjct 10741 CTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTTACATTCTCCAACGAGCTTATCTCTCG 10682 Query 64839 GGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCTCAA-----GG 64891 || ||||| |||||| || ||||| || || || ||| ||||| || | Sbjct 10681 TGATGAGGGTCTCCACACTGACTTTGC--TTGCCTGCTCTTCTCGCACCTGAACAACCGC 10624 Query 64892 ACAAACCATCACAT--GGGACTATAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAA 64949 | ||| ||| || ||| | | ||| || || ||||| ||||| || Sbjct 10623 CCCGACCCTCAGATTGTGGAGGA----CGTTATCGTGGAA---GCTGTCTCCATTGAGAA 10571 Query 64950 GGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCCGATAAGATGAA 65009 ||| ||| | |||| ||| ||||| || ||| | |||||| | || | |||| Sbjct 10570 GGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTG 10511 Query 65010 ACAGTATATCGAATTTGTAGCAGA---TCGCCTGCTTACTCAGTTTGGTATTAAGCCCTA 65066 ||||| || || || || || || || |||| | ||| |||| | || || Sbjct 10510 CCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTC---TTGGCAACAACAAGTA 10454 Query 65067 CTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAA 65126 || ||| | | || |||||||||| ||||| | ||| ||||| || ||||| || Sbjct 10453 CTTCAATGCCACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAA 10394 Query 65127 CTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 ||| || || ||| | || ||||||||| Sbjct 10393 CTTCTTCGAGAAGCGTGTCGGTGATTAC 10366 >seq581 Length=14361 Score = 154 bits (170), Expect = 2e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 || ||||| || || || |||||||| || ||||||||||||||| | |||| ||| | Sbjct 6941 GTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGCGATACCATCGAC 7000 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 || | ||| ||||| |||||||| || || ||||| || |||||||||||| | || Sbjct 7001 AACGTTAAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTTTGATC 7060 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 || ||||||||||| |||||||| | |||||| || | ||||| || | || |||||| Sbjct 7061 TTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGAAGGAA 7120 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||||| || | || |||| | || ||||| Sbjct 7121 TCTACTCTCCACTTGGTTCTGCGCTTGCGTGGTGG 7155 Score = 147 bits (162), Expect = 2e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27428 TTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGG 27487 ||||||||||||| || ||| | ||||| ||||| | || | || | || | ||| Sbjct 6649 TTACCGGCAAGACCATCACTTTGGAGGTCGAGTCGAGCGACACTATCGACAACGTCAAGA 6708 Query 27488 CTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTA 27547 || |||||||| ||||| || |||||||| ||||||||||| || || || ||||| | Sbjct 6709 GCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATCTTCGCTGGCA 6768 Query 27548 AGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTC 27607 |||| || ||||||| |||||||| | |||||||| |||| ||||| ||||| || | Sbjct 6769 AGCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAACATCCAGAAGGAGTCCACCCTCC 6828 Query 27608 ATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || || | ||||| || |||||| Sbjct 6829 ACCTTGTTCTTCGTCTCCGTGGTGGA 6854 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| ||||| || |||||||| ||| Sbjct 7157 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACAATTACGCTGGAGGTTGAATCATCC 7216 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||| || || |||||||||||||| |||||| Sbjct 7217 GACACGATCGATAATGTGAAGTCAAAGATTCAAGATAAAGAGGGAATTCCTCCTGACCAG 7276 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| ||||| || || ||||| || || |||| || || | | || || || Sbjct 7277 CAGCGTCTCATTTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACTTTGTCCGATTACAAC 7336 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || || || || | || | ||| | |||||||| ||||| Sbjct 7337 ATCCAGAAAGAGTCTACATTGCACTTGGTCCTCCGTCTTCGTGGTGG 7383 Score = 143 bits (158), Expect = 3e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| || ||||||||||| ||| | || ||||| || | Sbjct 7385 ATGCAGATCTTCGTTAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAA--AGCT 7442 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||| | || || || ||||||||||| ||||| ||||||| Sbjct 7443 CGGACACTATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACC 7502 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || |||||||| ||||| || ||||||| || || || ||||||| | Sbjct 7503 AGCAACGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGCACGCTCTCAGACTACA 7562 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 || | || ||||| ||| | || | ||| ||||||| || |||||| Sbjct 7563 ATATTCAGAAGGAGAGCACCTTACACTTGGTCCTGCGTCTCCGTGGTGGA 7612 >seq10 Length=49175 Score = 132 bits (146), Expect = 5e-26 Identities = 142/185 (77%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || || |||||||| | || | ||| Sbjct 27828 TTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 27769 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||||| || || |||||||||||||| || || || |||||||||||||| Sbjct 27768 GACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCGTCTG 27709 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAA 27593 || || || |||||||| || ||||||| || ||||| ||| ||||| || |||| || Sbjct 27708 ATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGC-GACTACAACATCCAGAA 27650 Query 27594 GGAAT 27598 || || Sbjct 27649 GGTAT 27645 >seq300 Length=19297 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||||||||| || || |||||||||||||| || || ||||| ||||| |||||| Sbjct 1482 GACAAGGAGGGAATCCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 1423 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | ||||| || | ||||| || |||| ||||| ||||| ||||| || || | Sbjct 1422 GACGGCCGTACTCTTTCTGACTACAACATCCAGAAGGAGTCCACCCTTCACCTCGTGCTC 1363 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 1362 CGCCTGCGTGGTGG 1349 >seq273 Length=19895 Score = 111 bits (122), Expect = 2e-19 Identities = 377/578 (65%), Gaps = 16/578 (3%) Strand=Plus/Minus Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 |||| ||||||||| || | || ||||||| || | || || ||||||||| Sbjct 12774 GGGC-CTCGTTAGGACAGAAGAGAGTCCAGTCGCCGTTGGCTTCAACTCGCTTCATGAAC 12716 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||| || |||||||||| ||| || |||||| | | | ||||| | ||| ||| Sbjct 12715 AAGTCCGGAGTCCAGAGGGCATAGAAGAGATCGCGGGCTCTCACTTCCTCTTTACCGTGG 12656 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || ||| | ||||| || || | || || || ||||| ||||||| || | ||| Sbjct 12655 TTCTTGCGGAGATCGAGGAACTCGAAGACATCGGCGTGCCAAGGCTCCAAGTAAATGGCA 12596 Query 81361 ATCGACCCCTTG-CGACGG---CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATAC 81416 | | | ||| | || | || ||||||| || || | |||||| ||| || || Sbjct 12595 AAAG-CACCTGGACGCTTGTTTCCTCCCTGGTCTACATATCTGGCAGTGTTGTTGAACAC 12537 Query 81417 ACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTT 81476 || | ||| || | ||||||| || |||||| ||||| | || || || | Sbjct 12536 CCGGAGCATGGGAACAATACCATTGGAGGAACCGTTGGTACCACCAATGTAGGAGCCGGT 12477 Query 81477 GGCGCGCA--CCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCA 81534 || || | | ||| ||||| ||||||| ||||| | ||| || ||| ||| Sbjct 12476 AGCACGGATGCGGTGCACATTGA--GACCGATTCCACCAGCGGTCTTCGAGATCAATGCA 12419 Query 81535 CACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAA 81594 || || | || |||||||| || ||||||||||| | ||||| || | |||||| Sbjct 12418 CATGTCTTGAGCGTGTCATAAATACCTTCGATGCTATCCTCCTTCATATCGA-CAAGAA- 12361 Query 81595 CAGCTTGA---CATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGA 81651 ||| ||| | |||||| | || |||||||||| || || | || || Sbjct 12360 -AGCATGAAGCAAGCTGAGGCTGAGGGGTACCAGCATTGAACAAAGTCGGCGAGGCATGG 12302 Query 81652 ATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCG 81711 ||||||| | ||||||| || |||||| || | | ||| || | ||| Sbjct 12301 GTGAAATACTTCTGAGACATCAAGTGATAGGTCTCGATAGCCTTCTCAATGTCATTACCA 12242 Query 81712 TGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 |||||||| | || |||||||| || | || ||| || Sbjct 12241 TGAATACCAACAGAGACACGCATCAAAAGGTGCTGAGG 12204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570264611203760