Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq581 143 6e-29 seq10 98.7 2e-15 >seq581 Length=14361 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| | ||| || || || | |||||| || | | || Sbjct 7606 ACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCTGAGAGCGT 7547 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| ||||||||||| ||||| |||||||| ||||| ||||| || |||||||| Sbjct 7546 GCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACC 7487 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| || ||||| ||||| ||| |||| || || || Sbjct 7486 CTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAA 7427 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 7426 AGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 7385 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| ||||| || || |||| || || || | | || | ||||| Sbjct 6838 AGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCAGAGAGGGTACGGCCATCC 6779 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || ||||| |||||||| || Sbjct 6778 TCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 6719 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| | || || || || ||||| ||| Sbjct 6718 TGAATCTTGCTCTTGACGTTGTCGATAGTGTCGCTCGACTCGACCTCCAAAGTGATGGTC 6659 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 6658 TTGCCGGT 6651 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || | ||||||||| ||||| || || | ||||| || | || ||| | || || Sbjct 7141 CAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCGACAGAGTACGACCGTC 7082 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || |||||||| ||||||||||| | || || |||||||| ||||| ||||| ||||| Sbjct 7081 CTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGGGAATGCCTTCTTTGTC 7022 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||| || ||| || |||||||| || | || || || | ||||| || Sbjct 7021 CTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAACCTCAAGGGTGATAGT 6962 Query 225681 CTTGCCCGT 225689 ||| || || Sbjct 6961 CTTTCCAGT 6953 >seq10 Length=49175 Score = 98.7 bits (108), Expect = 2e-15 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 27650 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCGAAGATC 27709 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || ||||| |||||||| |||||||| ||| || ||| Sbjct 27710 AGACGCTGCTGGTCGGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 27769 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| | || ||||| | || || ||||| ||||| Sbjct 27770 ATGGTGTCGCTCGACTCAACGTCGAGGGTAATGGTCTTACCCGT 27813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192433061017562