Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq273 206 4e-48 >seq273 Length=19895 Score = 206 bits (228), Expect = 4e-48 Identities = 598/911 (66%), Gaps = 17/911 (2%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 12808 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 12749 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | | ||| || ||||| || | || || |||| || ||| || Sbjct 12748 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGCATAGAAG 12689 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| |||| ||| ||| || || || ||||| ||||| |||||||| | Sbjct 12688 AGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAAG 12629 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 | ||| | ||||| || || | || || || | | |||| || || || || |||||| Sbjct 12628 ACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCCC 12569 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || |||| ||||||||||||||| || | || | | ||| |||| ||| || || || Sbjct 12568 TGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGAG 12509 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT--ATTACTAATAGATAGGC 76877 | ||| || || ||| ||| || || ||||| || | | || | || | Sbjct 12508 GAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGAC 12451 Query 76878 CTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCT 76937 | ||||| || || | || ||||| | ||||| || | |||||||| || || | Sbjct 12450 CGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCTT 12391 Query 76938 CTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTC 76997 | || ||||| ||| |||| | | |||||| || || | ||| | ||| || | Sbjct 12390 CGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTAC 12331 Query 76998 CTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATG 77057 | ||||| ||||| || || || ||||| ||||| | || | ||| | | | || | Sbjct 12330 CAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAGG 12271 Query 77058 TTTCAATAACTGCTTCTATATCCCATT--GATGAATTCCTACAGCGACACGCATCAACAT 77115 | || ||| | ||||| || |||| |||||| || |||| |||||||||||| | Sbjct 12270 TCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAAG 12213 Query 77116 ATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGA-TTTTTCCAAAG 77174 |||||||| ||||| || ||| || || | ||||||||| || | || Sbjct 12212 GTGCTGAGGACGTTCAGCAACCTTTCCATCAATCCGAAGCAAGTATGACACGCTCAAGAG 12153 Query 77175 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 | || || || ||| ||||||| ||||| || | ||||| | |||| | || || || Sbjct 12152 TCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTTGAG 12095 Query 77233 TTTGTCCTTATATTTGGTAACAATATCCATGACAGT--GGTAGAAATAATTGGAGATCGT 77290 || ||| || ||| | || |||| || | | || || ||||| | || Sbjct 12094 TTCGTCGGCATGTTTCATGAC--TATCTCGTACGTTTCCTTTGATATCATTGGGGCAGGT 12037 Query 77291 ATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttt 77350 | ||| || || || | || | ||| |||| || || | ||| | || Sbjct 12036 TTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTGCTTC 11977 Query 77351 tttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGA 77410 ||||||| |||||| || ||||| || ||||| | |||||| ||||| || ||||| ||| Sbjct 11976 TTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTCTGGA 11917 Query 77411 TGTTGTGTAGT 77421 ||| ||||| Sbjct 11916 TGTGTGGTAGT 11906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712877160279360