Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F001695535.1_202016-07-27] 6,423 sequences; 35,784,535 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq581 127 5e-24 seq10 120 7e-22 >seq581 Length=14361 Score = 127 bits (140), Expect = 5e-24 Identities = 152/204 (75%), Gaps = 7/204 (3%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA---AAGCTCAGACACCA 177987 ||||||| || ||||| ||||| || |||||||| ||||| || |||| || |||| Sbjct 6939 TCGTGAAGACCCTCACTGGAAAGACTATCACCCTTGAGGTTGAGTCAAGC---GATACCA 6995 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| ||||| || || || |||||||||||||| || || || |||||||| || Sbjct 6996 TCGACAACGTTAAGAGCAAAATCCAGGACAAAGAAGGCATTCCCCCCGACCAGCAGCGTT 7055 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | |||||||| || || |||||||| || || | ||||| | || || ||| | || | Sbjct 7056 TGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCGGACTACAACATTCAGA 7115 Query 178108 AAGAATCAACACTGCATCTTGTTT 178131 | ||||| || || || |||| || Sbjct 7116 AGGAATCTACTCTCCA-CTTGGTT 7138 Score = 125 bits (138), Expect = 2e-23 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | || || |||||||| ||| Sbjct 7388 CAGATCTTCGTTAAGACGCTCACTGGCAAGACTATCACTTTGGAAGTTGAAAGCTCGGAC 7447 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||| || ||||| || || || || || ||||||||| Sbjct 7448 ACTATCGACAACGTCAAGTCAAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAGCAA 7507 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || |||||||| || || || ||||| || |||||| | || || Sbjct 7508 CGTCTTATCTTTGCTGGCAAGCAGCTAGAGGATGGACGCACGCT 7551 Score = 113 bits (124), Expect = 1e-19 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||||| ||||||||||| || ||||| || ||||| |||||| Sbjct 6687 GACACTATCGACAACGTCAAGAGCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAG 6746 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || |||||||| || || ||||| || ||||| | || || | || |||||| Sbjct 6747 CAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTCTCTGACTATAAC 6806 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| || || || || || || |||||| Sbjct 6807 ATCCAGAAGGAGTCCACCCTCCACCTTGTT 6836 >seq10 Length=49175 Score = 120 bits (132), Expect = 7e-22 Identities = 142/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || ||||| || || || || |||||||| || || ||| ||||| Sbjct 27829 TTTCGTCAAGACCCTCACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGC---GACAC 27773 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 27772 CATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAGCAGCG 27713 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || ||||| || ||||| | || || ||| || ||| |||| Sbjct 27712 TCTGATCTTCGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 27653 Query 178106 AAAAGAATCAA 178116 || | || || Sbjct 27652 GAAGGTATGAA 27642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203632139317062