Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq63 140 2e-28 seq76 105 4e-18 seq86 104 2e-17 >seq63 Length=8017 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1255 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1314 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1315 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1349 >seq76 Length=448689 Score = 105 bits (116), Expect = 4e-18 Identities = 227/337 (67%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 6157 CCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAA 6216 |||| |||| ||| | ||| | ||| |||| | || | ||||| || ||||| | Sbjct 258437 CCACCATGGCTACCGTCAACATTCGTCGGGATGTTACCGATCCCTTCTATCGTTACAAGA 258378 Query 6217 TGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGT 6274 || |||| |||| ||||| ||||||| ||||| ||||| || || |||||| |||| Sbjct 258377 TGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAACGGAATCAAGACCGTCGTTGT 258320 Query 6275 CAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAAT 6330 |||| || || |||||| || | || | ||| ||| || | ||| || || | Sbjct 258319 CAAC----CTCAACTCGGTCGCTCAGTCCCTTGCACGTCCTCCCGCATACGTGATCAAGT 258264 Query 6331 ATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCG 6390 | ||||| | ||| |||||||||||| | | | | | | || |||| ||| Sbjct 258263 ACTTCGGTTTCGAGCTTGGCGCTCAGGCCAACGCCAAGCCGACCGATGACCGCTGGATCA 258204 Query 6391 TTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 | ||||| | || | | |||||||| ||||| | |||||||| || ||| ||| | Sbjct 258203 TCAACGGCGCCCACGATGCCGCCAAGCTCCAGGATTATCTTGACGGATTCATTTCCAAAT 258144 Query 6451 TTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || || || | | ||| | ||||| || ||||| Sbjct 258143 TCGTTCTTTGCAAGAAGTGCAAGAACCCTGAAACCGA 258107 >seq86 Length=245431 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||||| ||||| || | ||||||||||| ||||||||||| || Sbjct 17615 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 17556 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || |||| || || || ||||| || || ||||| || || | | Sbjct 17555 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 17496 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| || ||| ||| || || | || ||| || |||||| Sbjct 17495 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCA 17436 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||| || || || | || || ||||| |||||||| Sbjct 17435 ACTTCCAAAGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 17386 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 17158 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 17099 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | || || || || || || | || || || |||| || Sbjct 17098 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 17039 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| ||||| ||| || || | || ||||| | |||| Sbjct 17038 GAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 16979 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATA 38310 | || | || ||||| || || || | ||| ||||||| || Sbjct 16978 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGACTA 16937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334937537505977