Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq17 136 8e-27 seq11 120 6e-22 seq3 109 1e-18 >seq17 Length=650928 Score = 136 bits (150), Expect = 8e-27 Identities = 273/401 (68%), Gaps = 4/401 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||| || ||||| ||| Sbjct 62961 TCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTG 62902 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | |||| | |||||| || || | || ||||| || || ||||| | Sbjct 62901 GCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATG 62842 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| | ||||||||||||| | | ||||||| || ||| | | Sbjct 62841 TACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGG 62782 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGAC-A 251800 || ||||| || ||| || || ||| | | || ||| ||| | || || | | Sbjct 62781 AACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTCCTCCACAATCTG--AGGGTCGG 62724 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | ||| | ||| | ||| | || || |||| | ||| |||||||| || | Sbjct 62723 GGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCAC 62664 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||| | ||||||||| | || || ||||||| ||||| ||| | ||||||| Sbjct 62663 GAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGA 62604 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||| | | |||||||| ||||| | | |||||| ||| Sbjct 62603 AGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAACA 62563 >seq11 Length=637487 Score = 120 bits (132), Expect = 6e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| |||| ||| Sbjct 592804 GGTGAGGATCTGTGCAACTGCACGTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 592863 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | |||||||| | || || |||||| |||||||||| || | Sbjct 592864 CAGACCCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTACT 592923 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| |||||||| || |||| ||||| || || || || || Sbjct 592924 GGTAAGACCACTCTCATGCGCGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 592983 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 592984 GATGAGGTCAAGACTGTCTACGTTGAGCACGACTTGGATTC 593024 >seq3 Length=839071 Score = 109 bits (120), Expect = 1e-18 Identities = 411/636 (65%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||||||| ||| ||| | ||| |||| |||| | ||||| || || | Sbjct 442181 GATGAGCGCAAGGAGTGGTTGCGTCAATTCAAGCCGGGAACCTTCTTGGATCACTCAGTG 442122 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| || | | | ||||||||| ||||||||||||| || ||| | |||| | Sbjct 442121 TCCAAGATTTCATACACCGACTTCATCAACAAGGAGCTCATCCTATTCAGTATGGCGG-A 442063 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 |||| || || ||||| || ||||||||||||||||| || |||||| | Sbjct 442062 CAATGT---CCGATCGATTCCTTCGGTCGTGGATGGCCTCAAGCCCGGTCAACGTAAGGT 442006 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || | | | ||| || |||||| | || || ||||| | | || | || Sbjct 442005 TCTTTATACTTGTTTCCGACGCAACCTGAAGAAGGATATGAAGGTGGTCGAATTAGCGGG 441946 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | | || || | || ||| || || |||||||| |||||| |||| || Sbjct 441945 TCACGTTTCGGGTATGACTGCGTATCAACACGGTGACATCTCCCTGCAGCAGACCATCGT 441886 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 ||| |||||||| || || || ||||| | |||| ||| |||| ||| | Sbjct 441885 CGGCCTGGCACAGAGCTTCGTCGGGTCCAACAATGTAAACTGTCTGGAGCCCAGTGGTAA 441826 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| |||||| ||||||| || |||| ||| | ||||||| || Sbjct 441825 CTTTGGTAGTCGTCTCCAGGGTGGATCAGACTGTGCCAGTGCTCGTTATATCTACACTCG 441766 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTA 218912 ||||| |||| ||| | | ||| || || || |||||| | ||| |||| || Sbjct 441765 CCTGTCG-CCGT-TCGCTCGACGTG-TCTTCCATGCTCATGATGATCCTCTACTTACTTA 441709 Query 218913 TCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||||| |||||| || ||||| || || ||||| | |||| | | Sbjct 441708 CAACGAGGATGATGGTGAAAAAATCGAGCCGGAAATCTACGTGCCCGTCGTTCCCATGAT 441649 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 || || || ||||| | |||||||| || || | ||| | ||| ||| ||||| Sbjct 441648 CCTGGTTAACGGTGCTGACGGTATCGGCACCGGCTGGAGTTCATCCATCCCTAACTACAA 441589 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| |||||||| | |||||| | ||||| ||||| Sbjct 441588 CCCCGAGGACATCGTGGACAACCTTAAGCGACTCAT 441553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027805628600647