Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq86 93.3 3e-13 seq110 91.5 1e-12 >seq86 Length=245431 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || | || | ||| ||||| || |||||||| | | ||| | Sbjct 17375 AGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGTGCGG 17316 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| || || || ||||| ||||| || | ||||| |||||||||||||| ||| Sbjct 17315 CCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCCCTCT 17256 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 ||||||||||| ||| || || || || || || | ||| | | || || || Sbjct 17255 TTATCTTGAATCTTTGACTTCACATTATCGATCGTGTC-GGATGATTCAACCTCCAGCGT 17197 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || || || || ||||| || |||||||| |||||| Sbjct 17196 AATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCATA 17157 >seq110 Length=104862 Score = 91.5 bits (100), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || || || ||||| ||||| || || || ||| || |||||||| ||||| ||||| Sbjct 47324 GCGGTTATCACTGTGCCAGCCTACTTCAACGACAACCAGCGTCAAGCGACTAAGGATGCC 47383 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 ||| ||| | || || || || |||||||| ||||| ||||| ||||||||||| | Sbjct 47384 GGAGCTATCTCGGGTCTCAACGTCCTTCGTATCATCAACGAACCCACTGCTGCTGCCATC 47443 Query 550520 GCATATGGACTTG 550532 || || || |||| Sbjct 47444 GCCTACGGTCTTG 47456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029170822364830