Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1717 125 5e-23 seq86 114 8e-20 >seq1717 Length=947 Score = 125 bits (138), Expect = 5e-23 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 |||||||| || || ||||||||||| || || || || ||| | || |||||||||||| Sbjct 229 GTAACTGAAGCTGTTATTACTGTTCCTGCTTACTTCAACGATGCACAGCGTCAAGCAACT 288 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| || | |||||||||| | | ||| |||||| || || || ||||| || Sbjct 289 AAAGATGCAGGTAAAATTGCAGGTTTAGAAGTTAAACGTATCATCAACGAGCCAACTGCT 348 Query 474848 GCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||||||| | |||| | || ||||| Sbjct 349 GCGGCACTTGCGTTTGGTATGGACAAGAA 377 >seq86 Length=245431 Score = 114 bits (126), Expect = 8e-20 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || | |||| ||||| | || ||||| | | ||| Sbjct 17379 ACGAAGACGGAGGACCAAGTGCAATGTAGACTCTTTCTGGATGTTGTAATCGGACAAAGT 17320 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||| || ||||| || || ||||| ||||| || || |||||||||||||| Sbjct 17319 GCGGCCATCTTCGAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGAATTCC 17260 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 || || |||||||||||| || ||| || || || || | || | || || | Sbjct 17259 CTCTTTATCTTGAATCTTTGACTTCACATTATCGATCGTGTCGGATGATTCAA-CCTCCA 17201 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||| || || |||||||||||||| |||||||| || Sbjct 17200 GCGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAAATCTG 17161 Score = 104 bits (114), Expect = 2e-16 Identities = 117/154 (76%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||| || || ||||| |||||||| ||||||||||| || || || ||||| || ||||| Sbjct 17541 ATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGGGGAATACCCTCCTT 17482 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 |||||| |||||| ||||| || ||||| || | | | | || || ||| | | | Sbjct 17481 GTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCAACTTCCAAAG-TGA 17423 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || ||||| ||||||||||| || || Sbjct 17422 TAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTG 17389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268077667885316