Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1717 111 1e-18 seq18 86.0 5e-11 >seq1717 Length=947 Score = 111 bits (122), Expect = 1e-18 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 || || || | |||| |||||| || ||||||||||| || || || || | ||| Sbjct 377 TTCTTGTCCATACCAAACGCAAGTGCCGCAGCAGTTGGCTCGTTGATGATACGTTTAACT 318 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | | ||| |||||| | |||||||||||||| ||||| | |||| |||||| || || Sbjct 317 TCTAAACCTGCAATTTTACCTGCATCTTTAGTTGCTTGACGCTGTGCATCGTTGAAGTAA 258 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTAC 282480 ||||||||||||||||| || || ||||| Sbjct 257 GCAGGAACAGTAATAACAGCTTCAGTTAC 229 Score = 86.0 bits (94), Expect = 5e-11 Identities = 96/127 (76%), Gaps = 6/127 (5%) Strand=Plus/Minus Query 86125 GCAAGAGCTGCTGCAGTTGGTTCATTAATTAT---TTTAAGAACATCTAAACCCGCAATT 86181 ||||| || || |||||||| || || || || ||||| | |||||||| |||||| Sbjct 359 GCAAGTGCCGCAGCAGTTGGCTCGTTGATGATACGTTTAA---CTTCTAAACCTGCAATT 303 Query 86182 TTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATA 86241 ||| | | ||| ||||||||| | |||||| || || || || || || ||||||||| Sbjct 302 TTACCTGCATCTTTAGTTGCTTGACGCTGTGCATCGTTGAAGTAAGCAGGAACAGTAATA 243 Query 86242 ACTGCTT 86248 || |||| Sbjct 242 ACAGCTT 236 >seq18 Length=580872 Score = 86.0 bits (94), Expect = 5e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 ||| ||||||||||| | |||||||||||||| ||| ||||| |||||||| | || || Sbjct 316434 TGAGTTTTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTTATTGATACAGCTGTCAAGAC 316375 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAG 435228 || || || |||||||| || |||| || || ||| Sbjct 316374 CGCAGAAACCGGTTATATCCAGCGAAAGCTGGTTAAG 316338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740514190302942