Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq1552 105 6e-18 >seq1552 Length=1239 Score = 105 bits (116), Expect = 6e-18 Identities = 139/192 (72%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 134772 CACCACCTTGCCAGTTTACAGACTTAGAAATACCCCCTTGATCTTCACCATCGATCACTT 134831 |||||| |||||| | || || | ||| || || ||||| || ||| || || |||| Sbjct 215 CACCACATTGCCACTCCACGGATTGAGATATGCCACCTTGCTC---ACCTTCAATGACTT 159 Query 134832 TTTCCAAGCGCGGAATAATATGGGTATGACAATGATCACCTAGCTCGATTGAGATCCAAC 134891 |||| || ||||| |||| || || ||| ||||||||| | ||||| || | Sbjct 158 TTTCTAAACGCGGGATAACGTGAGTTTGATCATGATCACCCATTTCGATACCAATGTAGT 99 Query 134892 GTCTTTTCATCTTGTGAGCTACAGCAGCAGTAGTTCCCGAACCACCGAATGAATCCAATA 134951 |||||| ||| |||||||||||||| || ||||| | ||||| |||||||| | | Sbjct 98 GTCTTTCCATTTTGTGAGCTACAGCGGCGGTAGTCGCTGAACCTAAAAATGAATCAAGAA 39 Query 134952 CCAAATCGCCTT 134963 ||| ||| |||| Sbjct 38 CCATATCCCCTT 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444722841373600