Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq70 161 1e-34 >seq70 Length=149170 Score = 161 bits (178), Expect = 1e-34 Identities = 608/940 (65%), Gaps = 28/940 (3%) Strand=Plus/Minus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 || ||||| || || ||||||| |||| ||||| || || ||||| | | | | Sbjct 25323 TCAAATTCGTCACCATAAACATCGGCCAAGCCAGGGGCCTCGTTAGGACAGAAGAGAGTC 25264 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AA 69635 || | | | | | |||||| ||||| || | || ||| |||| || || ||| || Sbjct 25263 CAGTCGCCGTTGGCTTCAACTCGCTTCATGAACAAGTCCGGAGTCCAGAGGGC-ATAGAA 25205 Query 69636 GAGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCAT 69695 |||||| | || ||| ||| || || || || || |||||||| ||||| | Sbjct 25204 GAGATCGCGGGCTCTCACTTCCTCTTTACCGTGGTTCTTGCGGAGATCGAGGAACTCGAA 25145 Query 69696 AATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCC 69755 | ||| | ||||| || || | || || || | | || || || || |||||||| Sbjct 25144 GACATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCACCTGGACGCTTGTTTCCTCC 25085 Query 69756 CTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGA 69815 ||| |||| |||||||||||||| || | || | ||||| |||| ||||||||| || Sbjct 25084 CTGGTCTACATATCTGGCAGTGTTGTTGAACACCCGGAGCATGGGAACAATACCATTGGA 25025 Query 69816 TTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAAT--ATTACTAATAGATAGA 69873 ||| || || ||| ||| || || | || || || | | || | ||| Sbjct 25024 GGAACCGTTGGTACCACCAATGTAGGAGCCGGTAGCACGGATGCGGTGCACATTG--AGA 24967 Query 69874 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCC 69933 || ||||| || || | || ||||| | ||||| || | |||||||| ||||| Sbjct 24966 CCGATTCCACCAGCGGTCTTCGAGATCAATGCACATGTCTTGAGCGTGTCATAAATACCT 24907 Query 69934 TCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTT 69993 || |||||||| || |||| | | |||||| || || | ||| | || || Sbjct 24906 TCGATGCTATCCTCCTTCATATCGACAAGAAAGCATGAAGCAAGCTGAGGCTGAGGGGTA 24847 Query 69994 CCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTAT 70053 || ||||| || || || || || || || ||||| | || | ||| | || | || Sbjct 24846 CCAGCATTGAACAAAGTCGGCGAGGCATGGGTGAAATACTTCTGAGACATCAAGTGATAG 24787 Query 70054 GTTTCAATAGCTGATTCTATATCCCACT--GATGAATTCCTATCGCGACACGCATCAACA 70111 || || ||||| |||| || || | |||||| || | | |||||||||||| | Sbjct 24786 GTCTCGATAGC--CTTCTCAATGTCATTACCATGAATACCAACAGAGACACGCATCAAAA 24729 Query 70112 TATGCTGAGGTCGTT---CTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCA 70168 |||||||| |||| | ||| || || | || | || |||||| || | Sbjct 24728 GGTGCTGAGGACGTTCAGCAACCTTTCCATCA---ATCCGAAGCAAGTATGACCGCTCAA 24672 Query 70169 GAGTTTTAAACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATT 70226 |||| || || || ||| ||||||| ||||| || | ||||| | |||| | || || Sbjct 24671 GAGTCTTGAAGCCGAAAAAGTTGTAGTTGAAA--TCGCGGTCGTACACAATAGCGGAGTT 24614 Query 70227 TAGTTTATCCTTATATTTGGTAACTATATC---CATAACAGTAGGTGAGATAATCGGAGA 70283 |||| || || ||| | ||||| || | | | | ||| || || || | Sbjct 24613 GAGTTCGTCGGCATGTTTCATGACTATCTCGTACGTTTCCTT---TGATATCATTGGGGC 24557 Query 70284 TCGTTTACCATTTTTAGGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAG 70343 |||| ||| || || || | || | | ||| ||| || || ||| | Sbjct 24556 AGGTTTCTTATTCTTTGGGTTGATGTAATGGTATAGGTCTGAAATAACCAGGGAGAATTG 24497 Query 70344 tttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTC 70403 || ||||||| |||||| | || || | ||||| | || || ||||| || ||||| Sbjct 24496 CTTCTTTGTTTGCTTGTGAAGGTTCGAAACAGCTATACGAGCAGCAAGAATGGCGTAGTC 24437 Query 70404 AGGATGTTGTGTAGTACAAGTA-GCTGCTATTTCCGCAGC 70442 |||||| ||||| || ||| || || | || ||||| Sbjct 24436 TGGATGTGTGGTAGT-CATGTATGCCGCAGTCTCAGCAGC 24398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686888476085880