Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_028248.1 Length=136896 Score E Sequences producing significant alignments: (Bits) Value seq1552 105 6e-18 >seq1552 Length=1239 Score = 105 bits (116), Expect = 6e-18 Identities = 139/192 (72%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 29756 CACCACCTTGCCAGTTTACAGACTTAGAAATACCACCTTGATCTTCGCCATCGATCACTT 29815 |||||| |||||| | || || | ||| || |||||||| || || || || |||| Sbjct 215 CACCACATTGCCACTCCACGGATTGAGATATGCCACCTTGCTCA---CCTTCAATGACTT 159 Query 29816 TTTCCAAGCGCGGAATAATATGGGTATGACAATGATCACCTAGCTCGATTGAGATCCAGC 29875 |||| || ||||| |||| || || ||| ||||||||| | ||||| || || Sbjct 158 TTTCTAAACGCGGGATAACGTGAGTTTGATCATGATCACCCATTTCGATACCAATGTAGT 99 Query 29876 GTCTTTTCATCTTATGAGCTACAGCAGCAGTAGTTCCCGAACCACCGAATGAATCCAATA 29935 |||||| ||| || ||||||||||| || ||||| | ||||| |||||||| | | Sbjct 98 GTCTTTCCATTTTGTGAGCTACAGCGGCGGTAGTCGCTGAACCTAAAAATGAATCAAGAA 39 Query 29936 CCAAATCGCCTT 29947 ||| ||| |||| Sbjct 38 CCATATCCCCTT 27 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437926242473920