Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq2280 398 2e-106 seq2338 95.1 3e-15 >seq2280 Length=1101 Score = 398 bits (440), Expect = 2e-106 Identities = 647/921 (70%), Gaps = 19/921 (2%) Strand=Plus/Minus Query 24406 TCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGATTAA-TTTGAG 24464 |||||||| |||||||||| ||| |||| ||| ||| ||||||| |||| |||||| Sbjct 922 TCAAACCTGATCTGACAGTTACCCATTTTTTATT---GTGCCTGTCAGGTTAAATTTGAG 866 Query 24465 CTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATCGGTGTTCTG 24524 || |||||||| || ||||||||||||||||||||||||| ||| | | ||||| | Sbjct 865 CT-AAATTCTTCTCAGCCCAAATCCGTTTTCCATCAAGTAAAGTTTCAAGTGGTGTACGA 807 Query 24525 CCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAACCACTCATCT 24584 ||||||||||||||||||||||| || || | |||||| | | | ||| || ||| Sbjct 806 CCACAGCACATTTTTCCTTGATGAGTCCGTTCAGTATTATAGAATTTCAGCCAATCGTCT 747 Query 24585 AAATCCGCTTGTAATGTCGTTAAATCCG-TATAAATTTTCTTCCTAAATGCCACTTGGTA 24643 | ||| |||||||| || | ||| | |||||| ||||||||||| | | ||| || Sbjct 746 AGATCAACTTGTAAT-TCTTCCAATGAGCTATAAAGCTTCTTCCTAAACGTAATTTGATA 688 Query 24644 AAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGCGGATGTTT 24703 || || || || || || |||||||| || || ||||| || || || ||||| Sbjct 687 GAACTCCTGCAAAATCGTCTTATGGAAACGCTCACAGATACCATTTGTTTGCGGCGAAGC 628 Query 24704 TACCTTGGTTTTACTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAATCGTGATT 24763 | | || || || |||| ||||||||||| | ||| | ||| | |||||| || || | Sbjct 627 TGCTTTTGTCTTCGTGTGATCAATATCATTAACTGCCAGATACAACTCATAGTCATGTTG 568 Query 24764 TTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAACC 24823 ||||||||| || ||||| ||| | |||| ||| || | ||||| | ||| ||||| | Sbjct 567 TTCTACCTTACCGCAATACTCAGTACCTCTGTCTGTGAGGATGCGAAGCATTGGTAAGTC 508 Query 24824 TTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCGGT 24883 || || | || |||| ||||| |||||| || | ||| || || | || | || Sbjct 507 CTGAGATTGATAGAATGGCAACACACGATCATTGAGTAAATCAGCCGCTGTAATCGGTGT 448 Query 24884 CTTCATTGTATAAAGTTTTGCAA---ACGCCACTTTACTGTAAGTATCAATAAACGTTTG 24940 || ||||||| || || |||| ||| || || || ||||| || || || ||||| Sbjct 447 TTTTGTTGTATAGAGCTT-GCAATGAACG--ACCTTGCTATAAGTGTCGATGAATGTTTG 391 Query 24941 TTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCAAG 25000 |||||| || || || || |||||||| || || ||||| || || ||||| | ||| | Sbjct 390 TTGATAGATTCGTCCAACACCTTTGAGATTCCCGACATAAAAGGTGTCTTGCGCGCCTAA 331 Query 25001 ATAGCCAGGGTGTGCCGTTTCAATTTCACCACAGGCAATCTCATCTTCTTTCTTACGCTC 25060 |||||| || || || ||||| ||||||||||| |||| ||||| || | |||||| || Sbjct 330 ATAGCCTGGATGAGCTGTTTCGATTTCACCACAAGCAACGTCATCCTCATGCTTACGTTC 271 Query 25061 TAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTT---TTC 25117 | || | ||| ||| | | | |||||| | | || ||| ||| || Sbjct 270 AAGTGCCGCAATCTGCTGATCATTTAATTCAATACCATCCTGTG---CCACTTTAGCCTC 214 Query 25118 CAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACGTAC 25177 || || |||| | | |||||| || | | || |||||| | ||| || || || || Sbjct 213 AAGTGCTTTTAAACGCTTCTTAAAGTTTTCTAAATCATGACGAAGCCATATAGAGCGAAC 154 Query 25178 ACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCGTTACTCACTCTTACCTGTCC 25237 || | ||||||| || | || | || || | ||| |||||| | ||| || Sbjct 153 CCCACTCCCTGAAACGAATACACCCTTCTTGCGTAATTCATTACTCGTACGGTGCTGACC 94 Query 25238 AAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTATTGCCTCATCAACACG 25297 | |||| || | | || || || | | |||||| || || | | ||||| ||||| Sbjct 93 ATATGCGGGATATTGAATTGCGAAATCAATAACAGCCTGTTCAGTAGTATCATCTACACG 34 Query 25298 ATTTTTTAAGTTGGGAACGCG 25318 |||||||| || || || || Sbjct 33 GTTTTTTAAATTTGGTACTCG 13 >seq2338 Length=887 Score = 95.1 bits (104), Expect = 3e-15 Identities = 165/234 (71%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 25368 TGATAACGATAGAATGTATCTCGGCTCATTCCCATTACTTTGCAGGCTTGAGAAATATTA 25427 ||||| ||||| |||||||||| | ||||| |||||||| ||| || | ||| Sbjct 47 TGATAGCGATAAAATGTATCTCTTGAAACCCCCATCACTTTGCATGCTCTGGATACATTC 106 Query 25428 CCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAATGAGAGGGTTGTTAGAA 25487 || ||||| |||||||| | | || ||||||||||||| | ||||||| | Sbjct 107 TGAAGCTCTTCAGCTAAATTAAGCAGTCCTACTTTGTGTTTAATGATTTGATTGTTAGTA 166 Query 25488 TAAAACAT--GAGAGTTTCCTTTTTGTTTAGATTGA-TTTTTGACACTCATATTCTAAAC 25544 | ||||| || |||| || ||||||| |||| | ||| ||||| | | || ||| Sbjct 167 TGCAACATAAGAAAGTTACC--TTTGTTT-GATTAAGATTTCGACAC-CTTTATCAAAAT 222 Query 25545 GGGAAACTCTCACTTTTTAGAGTGAATTGTCAGATCAAGTCTGATCTTCTACAC 25598 ||| |||| || |||||| || | ||| |||||||||||| || ||||| Sbjct 223 GGGTAACTTTCTCTTTTTCAAGAAGAATGTACGATCAAGTCTGAACTAATACAC 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114319986589204