Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_028956.1 Length=52139 Score E Sequences producing significant alignments: (Bits) Value seq2280 396 9e-106 seq2338 95.1 4e-15 >seq2280 Length=1101 Score = 396 bits (438), Expect = 9e-106 Identities = 649/923 (70%), Gaps = 23/923 (2%) Strand=Plus/Minus Query 40673 TCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGATTAA-TTTGAG 40731 |||||||| |||||||||| ||| |||| ||| ||| ||||||| |||| |||||| Sbjct 922 TCAAACCTGATCTGACAGTTACCCATTTTTTATT---GTGCCTGTCAGGTTAAATTTGAG 866 Query 40732 CTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATCGGTGTTCTG 40791 || |||||||| || ||||||||||||||||||||||||| ||| | | ||||| | Sbjct 865 CT-AAATTCTTCTCAGCCCAAATCCGTTTTCCATCAAGTAAAGTTTCAAGTGGTGTACGA 807 Query 40792 CCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAACCACTCATCT 40851 ||||||||||||||||||||||| || || | |||||| | | | ||| || ||| Sbjct 806 CCACAGCACATTTTTCCTTGATGAGTCCGTTCAGTATTATAGAATTTCAGCCAATCGTCT 747 Query 40852 AAATCCGCTTGTAATGTCGTTAAATCCG-TATAAATTTTCTTCCTAAATGCCACTTGGTA 40910 | ||| |||||||| || | ||| | |||||| ||||||||||| | | ||| || Sbjct 746 AGATCAACTTGTAAT-TCTTCCAATGAGCTATAAAGCTTCTTCCTAAACGTAATTTGATA 688 Query 40911 AAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATACCATTCGTCTGGGG--ATGC 40968 || || || || || || |||||||| || || ||||||||||| || || || | || Sbjct 687 GAACTCCTGCAAAATCGTCTTATGGAAACGCTCACAGATACCATTTGTTTGCGGCGAAGC 628 Query 40969 TTCACTTTCGTTTTCGTATGCTCTATGTCATTTATCGCTAAATAAAGCTCATAATCGTGA 41028 | | ||| || ||||| || || || ||||| | || | ||| | |||||| || || Sbjct 627 TGC--TTTTGTCTTCGTGTGATCAATATCATTAACTGCCAGATACAACTCATAGTCATGT 570 Query 41029 TTTTCTACCTTGCCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACATCGGTAAA 41088 | ||||||||| || ||||| ||| | |||| ||| || | ||||| | ||| ||||| Sbjct 569 TGTTCTACCTTACCGCAATACTCAGTACCTCTGTCTGTGAGGATGCGAAGCATTGGTAAG 510 Query 41089 CCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCACTGATAGCG 41148 | || || | || |||| ||||| |||||| || | ||| || || | || | Sbjct 509 TCCTGAGATTGATAGAATGGCAACACACGATCATTGAGTAAATCAGCCGCTGTAATCGGT 450 Query 41149 GTCTTCATTGTATAAAGTTTTGCAA---ACGCCACTTTACTGTAAGTATCAATAAACGTT 41205 || || ||||||| || || |||| ||| || || || ||||| || || || ||| Sbjct 449 GTTTTTGTTGTATAGAGCTT-GCAATGAACG--ACCTTGCTATAAGTGTCGATGAATGTT 393 Query 41206 TGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGAGCCA 41265 |||||||| || || || || |||||||| || || ||||| || || ||||| | ||| Sbjct 392 TGTTGATAGATTCGTCCAACACCTTTGAGATTCCCGACATAAAAGGTGTCTTGCGCGCCT 333 Query 41266 AGATAGCCAGGGTGTACCGTTTCAATTTCACCACAGGCAATCTCATCTTCTTTCTTACGC 41325 | |||||| || || | ||||| ||||||||||| |||| ||||| || | |||||| Sbjct 332 AAATAGCCTGGATGAGCTGTTTCGATTTCACCACAAGCAACGTCATCCTCATGCTTACGT 273 Query 41326 TCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTT---T 41382 || | || | ||| ||| | | | |||||| | | || ||| ||| Sbjct 272 TCAAGTGCCGCAATCTGCTGATCATTTAATTCAATACCATCCTGTG---CCACTTTAGCC 216 Query 41383 TCCAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACGT 41442 || || || |||| | | |||||| || | | || |||||| | ||| || || || Sbjct 215 TCAAGTGCTTTTAAACGCTTCTTAAAGTTTTCTAAATCATGACGAAGCCATATAGAGCGA 156 Query 41443 ACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCGTTACTCACTCTTACCTGT 41502 || || | ||||||| || | || | || || | ||| |||||| | ||| Sbjct 155 ACCCCACTCCCTGAAACGAATACACCCTTCTTGCGTAATTCATTACTCGTACGGTGCTGA 96 Query 41503 CCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTATTGCCTCATCAACA 41562 ||| |||| || | | || || || | | |||||| || || | | ||||| ||| Sbjct 95 CCATATGCGGGATATTGAATTGCGAAATCAATAACAGCCTGTTCAGTAGTATCATCTACA 36 Query 41563 CGATTTTTTAAGTTGGGAACGCG 41585 || |||||||| || || || || Sbjct 35 CGGTTTTTTAAATTTGGTACTCG 13 >seq2338 Length=887 Score = 95.1 bits (104), Expect = 4e-15 Identities = 166/236 (70%), Gaps = 7/236 (3%) Strand=Plus/Plus Query 41635 TGATAACGATAGAATGTATCTCGGCTCATTCCCATTACTTTGCAGGCTTGAGAAATATTA 41694 ||||| ||||| |||||||||| | ||||| |||||||| ||| || | ||| Sbjct 47 TGATAGCGATAAAATGTATCTCTTGAAACCCCCATCACTTTGCATGCTCTGGATACATTC 106 Query 41695 CCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAATGAGAGGGTTGTTAGAA 41754 || ||||| |||||||| | | || ||||||||||||| | ||||||| | Sbjct 107 TGAAGCTCTTCAGCTAAATTAAGCAGTCCTACTTTGTGTTTAATGATTTGATTGTTAGTA 166 Query 41755 TAAAACAT--GAGAGTTTCCTTTTTGTTTAGATTGA-TTTTTGACACTCATATTCTAAAC 41811 | ||||| || |||| || ||||||| |||| | ||| ||||| | | || ||| Sbjct 167 TGCAACATAAGAAAGTTACC--TTTGTTT-GATTAAGATTTCGACAC-CTTTATCAAAAT 222 Query 41812 GGGAAACTCTCACTTTTTAGAGTGAATTGTCAGATCAAGTCTGATCTTCTACATAT 41867 ||| |||| || |||||| || | ||| |||||||||||| || |||| || Sbjct 223 GGGTAACTTTCTCTTTTTCAAGAAGAATGTACGATCAAGTCTGAACTAATACACAT 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166718513723454