Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq53 105 6e-18 >seq53 Length=294304 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Plus Query 6546 GCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAA 6605 |||||| |||| |||||||| ||| | ||| |||| | ||| || | || ||| Sbjct 253206 GCTCGACATGGTCCAGGTAGACATGGGTATCACCCATGGCATGAACAAAGGTACCGGGAT 253265 Query 6606 CCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACG 6665 || |||| ||||||| ||||| | || | || ||||| ||||| ||||||| Sbjct 253266 GCAGGTCCACAGCATGAGCAATCATATGGGTCAAGAGGGCGTAGGAGGCAATATTGAACG 253325 Query 6666 GCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTC- 6724 |||| || | | | ||| | ||| || || |||||||||||| || | || ||| Sbjct 253326 GCACGCCGAGGGCGACGTCACACGAGCGCTGGTAGAGCTGGCAGTGGAGATGACCCTTCT 253385 Query 6725 --------------------GCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCG 6764 | ||||||||| ||| || | || || || ||||| | Sbjct 253386 GGTCTTGGCCATTGGGGTAGGAGACGTAGAACTGGGCGAACATATGACAAGGCGGGAGGG 253445 Query 6765 CCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGT 6824 ||||| |||||| |||||||| |||| ||| | ||| | | ||| |||| Sbjct 253446 CCATCTTCTTGAGATCGGCGGGGTTCCAGGCGCTCATGATGATGCGGCGGTCGAAGGGGT 253505 Query 6825 TCCGCTTCAAGGTGTCGATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCC 6883 | ||||| ||| | || | | || |||||||| | || ||||||| ||||| Sbjct 253506 TATTCTTCAGCTTGTGCACGACCT-CGGCGAGCTGGTCAACGCCTTGTCCCGTGTAGTCG 253564 Query 6884 GCTTCG-CTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCC 6942 | || | | | || ||||| ||||| ||||| | ||| ||||||||||| || || || Sbjct 253565 GTTTTGGCGTCGACG-TACTCGGCCCCGAAGTGGCGCCATTGGAACCCGTACACGGGACC 253623 Query 6943 CAAGTCGCCCTCCTCCCGAGATGG--GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCG 7000 || ||||| ||| || | ||| | || |||||| || || || || ||| Sbjct 253624 CAGATCGCCGACCT--CGCGGTGGTCCAGGCCGACCTTGTCGAGGAACTCACGGCTGCCG 253681 Query 7001 TGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGC 7036 | ||||||||||||| || || || |||||| Sbjct 253682 TTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGAGC 253717 Score = 105 bits (116), Expect = 6e-18 Identities = 334/516 (65%), Gaps = 29/516 (6%) Strand=Plus/Minus Query 34309 GCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAA 34368 |||||| || || || ||||||||||||| |||| || || || || ||||| Sbjct 253717 GCTCTCCGACCAAGGCGTCAAGATCTGGGACGGCAACGGCAGCCGTGAGTTCCTCGACAA 253658 Query 34369 GCGGGGGTTC--CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGG 34426 | || | ||| | || ||| ||||| |||| || || ||||||||||| ||| Sbjct 253657 GGTCGGCCTGGACCACCGCG--AGGTCGGCGATCTGGGTCCCGTGTACGGGTTCCAATGG 253600 Query 34427 AGACACTTTGGGGCGGAGTATCGGGGGAG-CGAAGCGGACTATTCGGGACAGGGAGCGGA 34485 | ||||| ||||| ||||| || | | | || | ||||| ||||||| || | || Sbjct 253599 CGCCACTTCGGGGCCGAGTA-CGTCGACGCCAAAACCGACTACACGGGACAAGGCGTTGA 253541 Query 34486 CCAGCT-GCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGA 34544 |||||| || | | || | ||| ||||| ||||| ||| | | ||| | | Sbjct 253540 CCAGCTCGCCG-AGGTCGTGCACAAGCTGAAGAATAACCCCTTCGACCGCCGCATCATCA 253482 Query 34545 TGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCT 34604 || |||| |||||||| |||||| |||||| ||||| || || || | || Sbjct 253481 TGAGCGCCTGGAACCCCGCCGATCTCAAGAAGATGGCCCTCCCGCCTTGTCATATGTTCG 253422 Query 34605 GCCAATTCTACGTCGC---------------------GAATGGGGAGCTGTCCTGCCAGC 34643 ||| ||||||||| | ||| || | || |||||||| Sbjct 253421 CCCAGTTCTACGTCTCCTACCCCAATGGCCAAGACCAGAAGGGTCATCTCCACTGCCAGC 253362 Query 34644 TCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTC 34703 |||| || || ||| | ||| | | | || ||||||||||| ||||| ||||| | Sbjct 253361 TCTACCAGCGCTCGTGTGACGTCGCCCTCGGCGTGCCGTTCAATATTGCCTCCTACGCCC 253302 Query 34704 TGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCATACGT 34763 | | || | ||||| ||||||| |||| || ||| || | || ||| | Sbjct 253301 TCTTGACCCATATGATTGCTCATGCTGTGGACCTGCATCCCGGTACCTTTGTTCATGCCA 253242 Query 34764 TGGGGGATGCGCATATCTACCTGAACCACATCGAGC 34799 |||| ||| | ||| |||||||| |||| |||||| Sbjct 253241 TGGGTGATACCCATGTCTACCTGGACCATGTCGAGC 253206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448249137036240