Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217615.1_202017-07-13] 2,367 sequences; 40,272,913 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq1288 98.7 2e-15 seq1053 98.7 2e-15 >seq1288 Length=2027 Score = 98.7 bits (108), Expect = 2e-15 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||||||||| || || || || || | || || |||||||| ||||| || || Sbjct 998 GACCGTACCGGTACAGGTACACGTTCGGTATTTGGTCATCAGATGCGCTTTGATCTTTCC 1057 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 |||| || || | | ||||| ||||| ||||| ||||||||||| | || ||| Sbjct 1058 CAAGGTTTTCCTTTACTCACCACCAAAAAAGTTCATTTCCGTTCTATCGTGATTGAACTG 1117 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAA-CATCAGTTACCTGAACGATAACGGGGTCACTAT 202727 |||||||||||||||| || ||||| |||| || | || || || ||| | || Sbjct 1118 TTGTGGTTCCTGAAAGGTGATACCAATGTTCAG-TATTTAAAAGACAATAAAGTCTCGAT 1176 Query 202728 CTGGGACGAATGGGCG 202743 ||||| ||||||||| Sbjct 1177 TTGGGATGAATGGGCG 1192 >seq1053 Length=1113 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2628 AGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGGTTGTTGGAGGTTCGAGTCCTCT 2687 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 82 AGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGGGGGTTCGAGTCCCTC 141 Query 2688 CTTCCCTGCCAA 2699 || ||||||||| Sbjct 142 CTGCCCTGCCAA 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788296675582000