Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13] 398 sequences; 37,541,693 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq32 140 2e-28 seq26 104 2e-17 seq62 100 2e-16 seq395 93.3 3e-14 >seq32 Length=7798 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1385 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1444 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1445 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1479 >seq26 Length=439641 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || ||||| | | ||||| ||||| || | ||||||||||| ||||||||||| || Sbjct 399669 TTTCCACCACGGAGACGCAGGACCAAGTGTAAGGTGCTCTCCTTCTGAATATTGTAGTCT 399728 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || | ||| | || |||| || || || ||||| || || ||||| || || | | Sbjct 399729 GAGAGCGTGCGTCCATCCTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGGTCTGGG 399788 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | || || ||||| || ||| ||| || || | || ||| || |||||| Sbjct 399789 GGAATACCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATAGTGTCCGAGCTTTCA 399848 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || ||||| || || || | || || ||||| |||||||| Sbjct 399849 ACTTCCAAGGTGATAGTCTTGCCAGTGAGCGTCTTAACGAAGATCTGCAT 399898 Score = 95.1 bits (104), Expect = 8e-15 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | ||| |||| ||||| || ||||| ||||| ||||| ||||| || | Sbjct 400126 TACCACCACGCAAGCGCAGAACCAAGTGGAGAGTAGATTCCTTCTGAATGTTGTAGTCCG 400185 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 ||| | ||| |||| || | || || || || || || | || || || |||| || Sbjct 400186 ACAGAGTACGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAAACGCTGCTGGTCGGGGG 400245 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||||| ||||| ||| || || | || ||||| | |||| Sbjct 400246 GAATGCCTTCTTTGTCCTGGATTTTGCTCTTAACGTTGTCGATGGTATCGCTTGACTCAA 400305 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATA 38310 | || | || ||||| || || || | ||| ||||||| || Sbjct 400306 CCTCAAGGGTGATAGTCTTTCCAGTGAGGGTCTTCACGACTA 400347 >seq62 Length=167888 Score = 100 bits (110), Expect = 2e-16 Identities = 226/337 (67%), Gaps = 12/337 (4%) Strand=Plus/Minus Query 6157 CCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAA 6216 |||| |||| ||| | ||| | ||| |||| | || | ||||| || ||||| | Sbjct 70931 CCACCATGGCTACCGTCAACATTCGTCGGGATGTTACCGATCCCTTCTATCGTTACAAGA 70872 Query 6217 TGCCGCGCATCTGCG--CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGT 6274 || |||| |||| ||||| ||||||| ||||| || || || || |||||| |||| Sbjct 70871 TGGAGCGC--CTGCAGTCCAAGATCGAGGGCAAGGGCAATGGAATCAAGACCGTCGTTGT 70814 Query 6275 CAACATGCCTGAA----GTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAAT 6330 |||| || || |||||| || | || | ||| ||| || | ||| || || | Sbjct 70813 CAAC----CTCAACTCGGTCGCTCAGTCCCTTGCACGTCCTCCCGCATACGTGATCAAGT 70758 Query 6331 ATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCG 6390 | ||||| | ||| |||||||||||| | | | | | | || |||| ||| Sbjct 70757 ACTTCGGTTTCGAGCTTGGCGCTCAGGCCAACGCCAAGCCGACCGATGACCGCTGGATCA 70698 Query 6391 TTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 | ||||| | || | | |||||||| ||||| | |||||||| || ||| ||| | Sbjct 70697 TCAACGGCGCCCACGATGCCGCCAAGCTCCAGGATTATCTTGACGGATTCATTTCCAAAT 70638 Query 6451 TTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || || || | | ||| | ||||| || ||||| Sbjct 70637 TCGTTCTTTGCAAGAAGTGCAAGAACCCTGAAACCGA 70601 >seq395 Length=523 Score = 93.3 bits (102), Expect = 3e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||| |||||||| ||||||| ||||||||| ||||||||||| |||||||||||| || Sbjct 175 CTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGC 234 Query 20009 TAATATTTAGCCTT 20022 |||||||||||| Sbjct 235 CCATATTTAGCCTT 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945575296738