Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13] 398 sequences; 37,541,693 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq13 132 1e-25 seq33 114 3e-20 seq54 105 1e-17 >seq13 Length=860547 Score = 132 bits (146), Expect = 1e-25 Identities = 272/401 (68%), Gaps = 4/401 (1%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | ||| || |||| ||||| ||||||||||| || ||||| || Sbjct 597568 TCGAAGAAGTTGGTCTTACCGGCCAGGGAGATGTTGTCCATGAAGTCAAATGGGTTGGTT 597509 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||| | | |||| | |||||| || || | || ||||| || || ||||| | Sbjct 597508 GCATTGAAGTACTTGTTGTTGCCAAGAGCGACCAGGAGACGGTCGGCGACGAACTCAATG 597449 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| | ||||||||||||| | | ||||||| || ||| | | Sbjct 597448 TACTGGCACATCAAGTTGGAGTTCATGCCAAGAAGAGCGCAAGGAAGAGCGTCAGTCAGG 597389 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGAC-A 251800 || ||||| || ||| || || ||| | | || ||| ||| | || || | | Sbjct 597388 AACTCCTTCTCAATGGAGACAGCTTCCACGATAACGTCCTCCACAATCTG--AGGGTCGG 597331 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 | ||| | ||| | ||| | || || |||| | ||| |||||||| || | Sbjct 597330 GGCGGTTGTTCAGGTGCGAGAAGAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCATCAC 597271 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 || ||| | ||||||||| | || || ||||||| ||||| ||| | ||||||| Sbjct 597270 GAGAGATAAGCTCGTTGGAGAATGTAAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGA 597211 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||| | | |||||||| ||||| | | |||||| ||| Sbjct 597210 AGATAGAGGCGAAGGATCCGGAGAAGAAGATACCCTCAACA 597170 >seq33 Length=2415969 Score = 114 bits (126), Expect = 3e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| || || ||||||| ||||| |||| ||| Sbjct 149710 GGTGAGGATCTGTGCAACTGCACGTTCTCCCTGGCCTATGGTGCCAAGATCTTGCTGAAC 149769 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| | | |||||||| | || || |||||| |||||||||| || | Sbjct 149770 CAGACCCATCTCCGCCTGAAGCGTGGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTACT 149829 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 ||||||| |||||| ||||| || || |||| ||||| || || || || || Sbjct 149830 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 149889 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || ||||||||| | || || Sbjct 149890 GATGAGGTCAAGACTGTCTACGTTGAGCACGACTTGGATTC 149930 >seq54 Length=404273 Score = 105 bits (116), Expect = 1e-17 Identities = 410/636 (64%), Gaps = 14/636 (2%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||||||| ||| ||| | ||| |||| |||| | ||||| || || | Sbjct 285056 GATGAGCGCAAGGAGTGGTTGCGTCAATTCAAGCCGGGAACCTTCTTGGATCACTCAGTG 284997 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 |||| || | | | ||||| ||| ||||||||||||| || ||| | |||| | Sbjct 284996 TCCAAGATTTCATACACCGACTTTATCAACAAGGAGCTCATCCTATTCAGTATGGCGG-A 284938 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 |||| || || ||||| || ||||||||||||||||| || |||||| | Sbjct 284937 CAATGT---CCGATCGATTCCTTCGGTCGTGGATGGCCTCAAGCCCGGTCAACGTAAGGT 284881 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || | | | ||| || |||||| | || || ||||| | | || | || Sbjct 284880 TCTTTATACTTGTTTCCGACGCAACCTGAAGAAGGATATGAAGGTGGTCGAATTAGCGGG 284821 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | | || || | || ||| || || |||||||| |||||| |||| || Sbjct 284820 TCACGTTTCGGGTATGACTGCGTATCAACACGGTGACATCTCCCTGCAGCAGACCATCGT 284761 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 ||| |||||||| || || || ||||| | |||| ||| |||| ||| | Sbjct 284760 CGGCCTGGCACAGAGCTTCGTCGGGTCCAACAATGTAAACTGTCTGGAGCCCAGTGGTAA 284701 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| |||||| ||||||| || |||| ||| | ||||||| || Sbjct 284700 CTTTGGTAGTCGTCTCCAGGGTGGATCAGACTGTGCCAGTGCTCGTTATATCTACACTCG 284641 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATG-TGCTC--CTTAAGTA 218912 ||||| |||| ||| | | ||| || || || |||||| | ||| |||| || Sbjct 284640 CCTGTCG-CCGT-TCGCTCGACGTG-TCTTCCATGCTCATGATGATCCTCTACTTACTTA 284584 Query 218913 TCTTGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||||| |||||| || ||||| || || ||||| | |||| | | Sbjct 284583 CAACGAGGATGATGGTGAAAAAATCGAGCCGGAAATCTACGTGCCCGTCGTTCCCATGAT 284524 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 || || || ||||| | |||||||| || || | ||| | ||| ||| ||||| Sbjct 284523 CCTGGTTAACGGTGCTGACGGTATCGGCACCGGCTGGAGTTCATCCATCCCTAACTACAA 284464 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| |||||||| | |||||| | ||||| ||||| Sbjct 284463 CCCCGAGGACATCGTGGACAACCTTAAGCGACTCAT 284428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831558674718