Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13] 398 sequences; 37,541,693 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq13 105 1e-17 seq54 98.7 2e-15 seq33 89.7 1e-12 >seq13 Length=860547 Score = 105 bits (116), Expect = 1e-17 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 243526 GAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTC 243585 || ||||| ||| | |||||| |||| ||| ||| ||||||||||||| | | Sbjct 597378 GAGAAGGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTG 597437 Query 243586 ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAA 243645 ||| | |||||||| || ||||| |||||||| | | |||| ||||| | | || Sbjct 597438 ATGTGCCAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAG 597497 Query 243646 GTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACT 243705 | ||| | | ||||| |||| ||| ||||| ||| || || || || || Sbjct 597498 TACTTCAATGCAACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACC 597557 Query 243706 AACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATG 243753 ||||||||||| ||||||||| ||||||| || ||||||||||| Sbjct 597558 AACTTCTTCGAGAAGCGTGTCGGTGATTACCAGAAAGCTGGTGTGATG 597605 >seq54 Length=404273 Score = 98.7 bits (108), Expect = 2e-15 Identities = 244/365 (67%), Gaps = 4/365 (1%) Strand=Plus/Plus Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATT-TCTAGAAGATTAGGGAAACAGC 298145 ||| ||||||||||||| | | |||| | || || || | ||| | || | || Sbjct 285315 GATGGGCGTGATGAACTCGATGAGGAACTCGGGGATCCTCAACAAGCTCGGGAATTGGGC 285374 Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205 | || |||||||| |||| | ||| ||||||| || ||| |||| ||||||| Sbjct 285375 T-TGCAAAAAGTTAATGAGCAAACCCTTGATGTGAGAACCATCATGATCCTGATCGGTCA 285433 Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265 ||||||||| ||| || ||||| ||| || || |||| |||| | || | Sbjct 285434 TGATCATCAGATGTCCATAACGCAGCCCACGGGTATCCGTGTATTCTTTCTTGTGCTGCA 285493 Query 298266 GGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCACGGAT 298324 || || | | ||||| | ||| ||||||| ||||||||| ||| | | | | Sbjct 285494 ACCCAAGGAAGTTTTTGATGTTCTG-GATTTCTGCGTTCTTCGAGATCTGTTCGAAAGTG 285552 Query 298325 GCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCG 298384 ||||| ||||| |||| || ||||| || || ||||| || ||| | || ||||| Sbjct 285553 GCATCACGGACGTTCAGCAGCTTTCCTCGGAGGGGGAAAACACCAAAGAGATCCGGACCG 285612 Query 298385 ACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGA 298444 ||||| | | || || || || || | ||||| || || || |||||||| || Sbjct 285613 ACCACCGCACGTCCAGCCATGGCCAGACCCTTGGCGGAGTCACCTTCTGTCAGAATCAGT 285672 Query 298445 GTGCA 298449 ||||| Sbjct 285673 GTGCA 285677 >seq33 Length=2415969 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 334143 TCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGCTGACCG 334202 ||||| || ||||| |||| || | ||||| |||||| || |||||||| || Sbjct 149921 TCGTGCTCAACGTAGACAGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 149862 Query 334203 TTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAGACCGTAG 334262 || ||||| ||||| ||||| | ||||| | ||||| || || |||||||| Sbjct 149861 TTGTTGATAGCACGCATGAGAGTGGTCTTACCAGTACCGTTGGGACCGAGGAGACCGTAA 149802 Query 334263 CGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACCATATGCC 334322 || | ||||||||||| || | || | |||||| | || || ||||||| ||| Sbjct 149801 CGCTGACCACGCTTCAGGCGGAGATGGGTCTGGTTCAGCAAGATCTTGGCACCATAGGCC 149742 Query 334323 AGAGAAAATTCACAATCACACAGATCCTCACC 334354 || || || || | |||||||||||||| Sbjct 149741 AGGGAGAACGTGCAGTTGCACAGATCCTCACC 149710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874376001300