Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13] 398 sequences; 37,541,693 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2 132 4e-26 >seq2 Length=284997 Score = 132 bits (146), Expect = 4e-26 Identities = 406/628 (65%), Gaps = 21/628 (3%) Strand=Plus/Minus Query 29777 TGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGT 29836 ||||||||||| | ||||| || || || || || || ||||||||||| || | | Sbjct 79058 TGGGCTCCCTCACCAGCTGCTCCTGCAAGGGCTCGACATGGTCCAGGTAGACATGGGTAT 78999 Query 29837 CTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACG 29896 | |||| || || ||||| || || | || | | | ||||| ||||| | | Sbjct 78998 CACCCATGGCATGAACAAAGGTACCGGGATGCAGGTCCGCAGCATGAGCAATCATATGGG 78939 Query 29897 TGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCT 29956 | | ||| | |||| ||| || || || || || ||||| | | ||| | ||| | || Sbjct 78938 TCAAGAGGGCGTAGGAGGCAATATTGAACGGCACGCCGAGGGCGACGTCACACGAGCGCT 78879 Query 29957 GGTAGAGCTGACAC--GAGA----------GCTCT---CC------GTCGCTCACGTAAA 29995 |||||||||| || |||| | ||| || || | ||||| | Sbjct 78878 GGTAGAGCTGGCAGTGGAGATGACCCTTCTGGTCTTGGCCATTGGGGTAGGAGACGTAGA 78819 Query 29996 ACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGG 30055 |||| | | || || || || || ||||| | || ||||||||||| Sbjct 78818 ACTGGGCGAACATATGACAAGGCGGGAGGGCCATCTTCTTGAGATCGGCGGGGTTCCAGG 78759 Query 30056 CGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCA 30115 ||| || ||||||||| | ||| ||||| ||| | | || |||| | | | Sbjct 78758 CGCTCATGATGATGCGGCGGTCGAAGGGGTTATTCTTCAGCTTGTGCACGACCTCGGCGA 78699 Query 30116 GCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30175 |||| || || || |||| |||||| | | ||| |||||| || ||||| | Sbjct 78698 GCTGGTCAACGCCTTGTCCCGTGTAGTCGGTTTTGGCGTCGACGTACTCGGCCCCGAAGT 78639 Query 30176 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30235 | | ||| |||||||||||||| || ||||| || || | || | ||| || | ||| Sbjct 78638 GGCGCCATTGGAACCCGTACACGGGACCCAGATCGCCGACCTCGCGGTGGTCCAGGCCGA 78579 Query 30236 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGA 30295 |||||| | || || | | |||||| ||||||||||||| || || | ||||||| Sbjct 78578 CCTTGTCGAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACGCCTTGGTCGGAGA 78519 Query 30296 GCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCC 30355 || ||| ||| | || || |||||| ||||| || | |||||||| Sbjct 78518 GCGGCAGGGATGAGGTGCAGCCGGAGATGAACCAGAGCAGTTCGGCGACGACGGCGCGGA 78459 Query 30356 AAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 ||||| | |||||| || |||||||| Sbjct 78458 GGAAGACGCGCTTGGTGGTCAGGAGGGG 78431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615617949254