Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20flavus_20[genbank_20GCA_5F002217635.1_202017-07-13]
398 sequences; 37,541,693 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 4e-18
>seq13
Length=860547
Score = 107 bits (118), Expect = 4e-18
Identities = 288/446 (65%), Gaps = 5/446 (1%)
Strand=Plus/Plus
Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936
|||| || || ||||| || ||||| ||||| ||||| ||| ||| || || || | |
Sbjct 597148 AGCGTCTCGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGATCCTTCGCCTCTA 597207
Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATC 25995
|||||||||| ||| || || |||||||| || ||| || ||||||||||| |||
Sbjct 597208 TCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCT-TACATTCTCCAACGAGCTTATC 597266
Query 25996 AGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTC 26055
| || ||||||||||||| || ||||| |||||||||| | || ||| || |
Sbjct 597267 TCTCGTGATGAGGGTCTCCACACTGACTTTGCTTGCCTGCTCTTCTCG---CACCTGAAC 597323
Query 26056 CACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
|| || | ||| || | | ||| || ||||| || ||||||
Sbjct 597324 AACCGCCCCGACCCTCAGATTGTGGAGGACGTTATCGTGGAAGCTGTCTCCATTGAGAAG 597383
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
||||| | | ||||||||| || | ||| ||
Sbjct 597384 GAGTTCCTGACTGACGCTCTTCCTTGCGCTCTTCTTGGCATGAACTCCAACTTGATGTGC 597443
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTAC 26235
|| |||||||||| || ||||||| ||| ||| | || || | || || |
Sbjct 597444 CAGTACATTGAGTTCGTCGCCGACCGTCTCCTGGTCGCTCTTGGCAACAACAAGTACTTC 597503
Query 26236 AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTC 26295
| | | | ||||| || ||||| ||||| ||||| || ||| || ||||||||||||
Sbjct 597504 AATGCAACCAACCCATTTGACTTCATGGACAACATCTCCCTGGCCGGTAAGACCAACTTC 597563
Query 26296 TTTGAAAAGAGGGTCGGCGACTATCA 26321
|| || ||| | ||||| || || ||
Sbjct 597564 TTCGAGAAGCGTGTCGGTGATTACCA 597589
Score = 93.3 bits (102), Expect = 8e-14
Identities = 179/260 (69%), Gaps = 7/260 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||||||||| || ||||||||
Sbjct 596693 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAAATTGATCTT 596752
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTC-TCA 25591
| ||||| | ||| |||| || || || | ||||||| || | ||| ||
Sbjct 596753 TCTAAGGATCTTCACGACTGGCACAACCGC-CTGAATGATGACGAGC-GCTTCTTCATCT 596810
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
||| | || |||||||| ||||| || || || || ||||| || ||| ||||
Sbjct 596811 CTCGCGTACTTGCCTTCTTTGCTGCCTCCGACGGCATTGTCAACGAAAACCTGCTCGAGC 596870
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711
| |||| | | || |||||| | ||||| || ||||||||||||||||| |
Sbjct 596871 GTTTCAGCGGAGAGGTGCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATTATGA 596930
Query 25712 TCGAAAATGTGCACTCTGAG 25731
|||| || | ||| |||||
Sbjct 596931 TCGAGAACATCCACGCTGAG 596950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928840178997120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |