Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 seq44 123 3e-23 seq192 122 9e-23 seq145 107 2e-18 >seq1 Length=367421 Score = 159 bits (176), Expect = 4e-34 Identities = 190/257 (74%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||||| || || |||||||||| ||||||| | || || Sbjct 34744 ATTTGGCAAATGTACAAGAAAGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATTGATCTC 34803 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||| || | ||||||| | || |||| ||| | ||||| |||||||| Sbjct 34804 TCCAAAGATCTGCACGACTGGAACAACCGTCTGAATGACGATGAGCGTTATTTCATCTCT 34863 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||| ||| ||||| ||||| || ||||| || | ||||| Sbjct 34864 CATGTCCTTGCCTTCTTCGCTGCCTCTGACGGAATCGTTAATGAGAACTTGTTGGAGCGC 34923 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | |||||||||||| | ||||| || |||||||||||||| |||||| || Sbjct 34924 TTCAGCAATGAGGTGCAGGTGCCTGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATT 34983 Query 116873 GAGAACGTGCACTCGGA 116889 |||||| | || ||||| Sbjct 34984 GAGAACATTCATTCGGA 35000 Score = 123 bits (136), Expect = 3e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||| ||||||| || | ||||| | | | || | | |||| |||||| Sbjct 35145 AGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTACTTTCGCTCAGCGCC 35204 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | ||||||||||| || || ||||| |||| || || || ||| || |||| || | Sbjct 35205 TTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTTCCATCTTCT 35264 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| || ||| | ||||| || || |||||| ||||||||||||||| | | Sbjct 35265 GGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 35324 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTG 117189 ||||||| ||||| |||||||| || Sbjct 35325 ACGAGGGACTGCACACAGACTTTGCTTG 35352 >seq44 Length=120029 Score = 123 bits (136), Expect = 3e-23 Identities = 138/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| ||||||| || | | ||||| | | Sbjct 98703 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCATC 98644 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| |||||| || || | ||||| ||||| |||||| | |||||||| || || Sbjct 98643 GACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 98585 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| || || ||||| || || | |||||||| | |||||||||||| ||||| Sbjct 98584 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 98525 Query 40878 GG 40879 || Sbjct 98524 GG 98523 >seq192 Length=879878 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| || || ||||| ||| | || || || || || Sbjct 213463 ATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTCC 213522 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| | ||| || || | ||||| ||||||||||| | ||||| Sbjct 213523 GACACGATTGACAACG-TGAAGAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCA 213581 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||| |||| || | | | |||||| ||| ||||| Sbjct 213582 GCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTACAA 213641 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || |||||| |||||| || || ||| |||| Sbjct 213642 TATTCAAAAGGAGAGCACGCTCCACCTGGTGCTGCG 213677 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||||||| | || ||||| ||| | Sbjct 212699 ATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAGC 212758 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || |||| || || ||||| ||||| | |||||| Sbjct 212759 GACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCAG 212818 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| ||||| ||||| || || | ||||| || ||| || ||| Sbjct 212819 CAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAAC 212878 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| | || ||||| || || Sbjct 212879 ATCCAGAAGGAATCTACTCTGCACCTGGT 212907 >seq145 Length=150552 Score = 107 bits (118), Expect = 2e-18 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 132941 GACAAGGAGGGAATCCCCCCCGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTCGAG 133000 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| || |||||| ||||||||||||||||||||| | || ||||| || ||| Sbjct 133001 GACGGTCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTG 133057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217860430080