Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13] 208 sequences; 28,240,437 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq113 199 4e-46 seq192 105 6e-18 seq44 86.0 6e-12 >seq113 Length=654563 Score = 199 bits (220), Expect = 4e-46 Identities = 430/639 (67%), Gaps = 8/639 (1%) Strand=Plus/Plus Query 23342 TCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGC 23401 ||||| || |||| || ||||| || |||| || ||||||||||| || ||||| | Sbjct 86029 TCAACTCGCTTCATGAACAGATCAGGGGTCCACAGGGCGTAGAACAGATCACGGGCTCTG 86088 Query 23402 ACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCAC 23461 || ||||| || ||| |||||| | ||||| || || || | || |||||||| Sbjct 86089 ACTTCCTCCTTACCGTGGTTCTTGCGAAGATCCAGGAACTCGAAGATATCGGCATGCCAA 86148 Query 23462 GGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGG 23521 ||||||||||||| ||||| ||||| || | ||| || || ||||| ||||| || | Sbjct 86149 GGCTCGAGGTAAATAGCAAAAGCGCCAGGGCGCTTGTTACCTCCCTGGTCGACATACCTA 86208 Query 23522 GCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCC 23581 || ||||||||| |||| | ||||| || || | |||||| || | || || || Sbjct 86209 GCAGTGTTGTTGAACACGCGAAGCATGGGAACAATACCGTTAGA-GGACCCATTAGTGCC 86267 Query 23582 GCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGA 23640 ||| | || ||| | || || | | |||||||| | || || || || | | Sbjct 86268 ACCAATGTAGGAGCCTGTGGCACGGATGCGGTGAACGTTAAGGCCGATACCGCCAGCTGT 86327 Query 23641 TTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTT 23700 ||||| ||||| || || || || ||||||||||| ||||| ||||| ||||| || Sbjct 86328 CTTCGAGATCATGGCACAAGTCTTAAGGGTGTCGTAGATACCCTCAATGCTATCCTCCTT 86387 Query 23701 GGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | |||| | ||| || || | | || | || ||| ||| | || |||||| || Sbjct 86388 CATATCGACGAGGAAGCAAGACGCAAGCTGGGGTTGGGGAGTACCAGCATTGAACAGAGT 86447 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || || || |||||| | ||||| || | ||| || || ||||| || Sbjct 86448 AGGAGAAGCATGAGTGAAGTATTTCTGAGACATGAGGTGGTAGGTCTCAATGGCCTTTTC 86507 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT---C 23877 ||| | | || || || || | || || ||||||| || || || || | || | Sbjct 86508 AATATTGTTGCCATGAATGCCAACCGCAACACGCATCAACAAGTGCTGCGGACGCTCAGC 86567 Query 23878 GACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATA 23937 ||| | ||| || ||| | ||| || || || | | || || || || ||| | Sbjct 86568 AACCTT---GCCATTGATTCGCAGCAGGTAGGACCGCTCGAGTGTCTTGAAACCGAAAAA 86624 Query 23938 GTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || ||||| ||||||||||| | || || || || || Sbjct 86625 GTTGTAGTTGAAGTCACGATCATATACAATAGCAGAGTT 86663 Score = 120 bits (132), Expect = 3e-22 Identities = 441/678 (65%), Gaps = 17/678 (3%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || |||||||| |||| | ||| | |||| || || || ||||| || ||| Sbjct 84742 TCAACAGTAAACTGGATGGGAGCGGAGGCAGCCATGGTACGCAGGTAGTACATTCCAGTC 84801 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 |||| |||||| |||||| | ||| || || || | || || | | ||| Sbjct 84802 TTCAAACCCATTTTCCACCCAGCAAAGTGCATACTGGTGAGCTTGCCCATAGTAGGCTCC 84861 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || || | |||| || ||| ||| || || || || || || ||||||||||| Sbjct 84862 TTCAGGTGAATGTTGAGAGATTGAGACTGGTCAATGAAAGCACCACGGTCGGCGGCCATC 84921 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | | | ||||| || |||||||| ||||||||||| || | |||| || Sbjct 84922 TGCAGGATGGTACGTTGGGAGATTTCCCACACGGTCTTGTAGAGAGCCTTGATGTCGGCG 84981 Query 22349 GGTATCGATTCGA-TCCTCTGGACGGACCCGTTAT-TGTGTATGATCAAATTTTTAATCG 22406 || || | | || | | || ||||| || || || | ||||| ||||| || Sbjct 84982 GGAAT-GTTGGGAATGTTTTGAACGGAGCCACCATCTGCG-ATGATACGGTTTTTCATGT 85039 Query 22407 TATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAA 22466 | || ||||| ||| | | || | ||| |||| || | |||| || || || | Sbjct 85040 TGTCCGACCACAGACCAAGGTCGACAAGATCCTTGAGAAGCCAAGGGTTAACGACCTGGA 85099 Query 22467 ACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 |||| || | ||||| | ||||| ||| ||||| || ||| | || || ||| |||| Sbjct 85100 ACTCACCAG-CAAGAACACGGCGAGAGTAGATGTTCGAGGTGTAAGGCTCAAAACATTCG 85158 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||| ||||| ||||| ||| ||||| |||||||| |||| || | ||| Sbjct 85159 TTGAAGCCCAGAATCTGGCTGGTGCTTGCGGTGGGCATCGGTGCCACCAACAAACTGTTA 85218 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTT--GAGCATCGACCAGTCCCACAGATCGGACG 22643 | | ||||||| | ||| || ||| ||| ||| ||||||||| || || | | Sbjct 85219 CGAACACCGTGCTGGGCAATCTTCGCCTTCAGAGAATC--CCAGTCCCAGAGGTCCGTGG 85276 Query 22644 GCGTCACATTGTCCCACATATCGTATTG--CAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 | || ||||||||||||| || || || || | | || || ||| ||| || Sbjct 85277 GGGTTC---TGTCCCACATATCATACTGGAGAATACCCTGAGAGACG--GGGGAGCCCTC 85331 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| ||||| || |||||| | | ||| || || || || ||| || |||| Sbjct 85332 GTAAGTTTCATAAGGACCAAACTCCTTGGCCAGCTCACAAGATGCAGTCAAAGCACCGTG 85391 Query 22762 ATATATAGTCTCGAAGAT 22779 ||| || ||||| ||||| Sbjct 85392 ATAGATGGTCTCAAAGAT 85409 >seq192 Length=879878 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| |||||||| || ||||| || |||||| | || || || | Sbjct 212698 CATGCAGATTTTCGTCAAGACTCTCACGGGCAAGACCATCACCTTGGAGGTCGAGTCCAG 212757 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | | || | ||||| || || ||| ||||| || | || || ||||| Sbjct 212758 CGACACTATTGACAATGTCAAGTCGAAGATTCAGGATAAGGAGGGTATCCCTCCTGACCA 212817 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||||||||| ||| | || || ||| | ||||||||| Sbjct 212818 GCAGCGCTTGATTTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTTTCCGATTATAA 212877 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || ||||| ||||| || ||||| || Sbjct 212878 CATCCAGAAGGAATCTACTCTGCACCTGGTTCT 212910 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| || || ||||| || || || |||| || ||| | ||| | | | Sbjct 213017 TCGTCAAGACCCTCACTGGCAAGACCATTACTCTCGAGGTGGAATCCAGCGATACCATTG 213076 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || || || ||||||||| || | || || |||||||||||||| | Sbjct 213077 ATAACGTTAAGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGTCTGA 213136 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||||||||| |||||||| || || || ||| ||||||||||| || | Sbjct 213137 TTTTCGCTGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCCGACTATAACATTCAGAAGG 213196 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||| || || || ||| | || | || |||| Sbjct 213197 AATCGACTCTCCACCTCGTCCTTCGTCTTCGTGGTGGTA 213235 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || || || || || ||| | || || || | || Sbjct 213462 CATGCAGATCTTCGTCAAGACTCTCACCGGAAAGACCATTACCCTGGAGGTGGAGTCCTC 213521 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAG-AATAGCG--GACAAGGAAGGCGTGCCGCCCGA 31308 ||||| | || | || || ||| || | | |||||||| ||| | || || || Sbjct 213522 CGACACGATTGACAACGTGAA---GAGCAAGATCCAAGACAAGGAGGGCATCCCTCCTGA 213578 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 |||||||||||| || |||||||| || ||||||||||| | ||| | |||||| Sbjct 213579 CCAGCAGCGTCTCATCTTCGCTGGTAAGCAGTTGGAAGATGGGAGGACCCTCTCCGATTA 213638 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || |||||||| || || || || ||||| || Sbjct 213639 CAATATTCAAAAGGAGAGCACGCTCCACCTGGTGCT 213674 >seq44 Length=120029 Score = 86.0 bits (94), Expect = 6e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| |||||||||| || ||||| | Sbjct 98704 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTTGAGTCGAGCGACACCAT 98645 Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320 ||| | ||||| | || ||||||||| || | || || ||||||||||| || Sbjct 98644 CGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCT 98585 Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380 || |||||||| || ||| | || || || ||||||| || |||||||| || Sbjct 98584 GATCTTCGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATTCAGAA 98525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765241007360