Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aspergillus_20fumigatus_20[genbank_20GCA_5F001643655.1_202016-05-13]
208 sequences; 28,240,437 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 1e-23
seq113 116 7e-21
>seq1
Length=367421
Score = 125 bits (138), Expect = 1e-23
Identities = 330/495 (67%), Gaps = 18/495 (4%)
Strand=Plus/Plus
Query 101852 ATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAATA-ACGATTTGG 101906
|||| |||||||| |||||||| || | ||||| | ||| ||| || ||| |
Sbjct 35138 ATCAGGAAGAAGGCCCAGTGGGCCATGAGATGGATTTCTGATAAGGAATCTAC--TTTCG 35195
Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966
| | | |||| ||||| || || || || |||||||| || ||| | || || |
Sbjct 35196 CTCAGCGCCTTGTGGCCTTCGCCGCTGTGGAGGGAATCTTTTTCTCTGGATCTTTTGCTT 35255
Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026
|||| |||||| | ||||| | || | ||||||||||||| | |||||| ||| |||
Sbjct 35256 CCATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCTGGTCTCACTTTCTCCAACGAGCTCA 35315
Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTG 102086
| ||| | ||||| || || || |||||||| ||| | || || | ||
Sbjct 35316 TCTCTCGTGACGAGGGACTGCACACAGACTTTGCTTGCCTTCTCTTTTCTCA---CTTGA 35372
Query 102087 TTGAT-ACCCCATCAAGAGAAAGG--ATTCTTGAAATTGTCACTGAAGCCGTCCGAATTG 102143
|| |||| |||| |||| ||| || ||| || ||| || || ||||
Sbjct 35373 ACCATCGCCCCGACAAG---AAGGTTATTGAGGATATTATCGTTGAGGCTGTGGCCATTG 35429
Query 102144 AACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGA 102203
|||| || || | |||| | || |||||| | |||| ||||||| ||| | |
Sbjct 35430 AACAGGAGTTCTTGACAGACGCTCTTCCTGTTGCTCTCCTGGGCATGAACTCTAAGCTAA 35489
Query 102204 TGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGC 102263
|| ||||||| ||||| || || || ||| || ||||||| | ||| | |||
Sbjct 35490 TGTGCCAGTATATTGAGTTCGTTGCTGATCGGCTGTTGGTTGCTCTTGGAAACAAGAAGT 35549
Query 102264 ACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCG-AGAATAAGACC 102322
||| || | ||||||||||| |||||||| | ||| || || | || | |||||
Sbjct 35550 ACTTCAACTCTCCCAACCCCTTCGACTTCATGGAAAGTATCTCGCTTGCAGGA-AAGACG 35608
Query 102323 AACTTTTTTGAAAAG 102337
||||| ||||| |||
Sbjct 35609 AACTTCTTTGAGAAG 35623
>seq113
Length=654563
Score = 116 bits (128), Expect = 7e-21
Identities = 188/268 (70%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || | ||||| || ||||| ||||| ||||| || || |||||| ||
Sbjct 86299 TGAACGTTAAGGCCGATACCGCCAGCTGTCTTCGAGATCATGGCACAAGTCTTAAGGGTG 86358
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| || ||||||||||||||||| || | | | | |||||||| || | ||| |||
Sbjct 86359 TCGTAGATACCCTCAATGCTATCCTCCTTCATATCGACGAGGAAGCAAGACGCAAGCTGG 86418
Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953
||| | || ||| ||| ||||| || || |||||||| || || || | | |||
Sbjct 86419 GGTTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCATGAGTGAAGTATTTCTGAGAC 86478
Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGAT-CCGTGAATGCCGACAGCCAC 95012
||||| | || || |||||| | || || | || | || |||||||| || || ||
Sbjct 86479 ATGAGGTGGTAGGTCTCAATGGCCTTTTCAATAT-TGTTGCCATGAATGCCAACCGCAAC 86537
Query 95013 ACGCATAATCATGTCCTGAGGGCGCTCA 95040
|||||| | || || ||| || ||||||
Sbjct 86538 ACGCATCAACAAGTGCTGCGGACGCTCA 86565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581362758640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |